Support for Apple Silicon M1 #153

stephangreene · 2021-12-09T21:16:55Z

Is support for the M1 on the roadmap?

I get the following when trying to install on M1:

$ pip install tomotopy
Collecting tomotopy
Using cached tomotopy-0.12.2.tar.gz (1.1 MB)
Preparing metadata (setup.py) ... done
Requirement already satisfied: numpy>=1.11.0 in /Users/sgreene/miniforge3/lib/python3.9/site-packages (from tomotopy) (1.21.1)
Building wheels for collected packages: tomotopy
Building wheel for tomotopy (setup.py) ... error
ERROR: Command errored out with exit status 1:
command: /Users/sgreene/miniforge3/bin/python3.9 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/private/var/folders/11/29tzm_tx4cd3p3rprtfq9kmc0000gn/T/pip-install-zbbc7pzy/tomotopy_f5103692bba0430b98d4e4f5cb2eacdf/setup.py'"'"'; file='"'"'/private/var/folders/11/29tzm_tx4cd3p3rprtfq9kmc0000gn/T/pip-install-zbbc7pzy/tomotopy_f5103692bba0430b98d4e4f5cb2eacdf/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(file) if os.path.exists(file) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, file, '"'"'exec'"'"'))' bdist_wheel -d /private/var/folders/11/29tzm_tx4cd3p3rprtfq9kmc0000gn/T/pip-wheel-txzeomxe
cwd: /private/var/folders/11/29tzm_tx4cd3p3rprtfq9kmc0000gn/T/pip-install-zbbc7pzy/tomotopy_f5103692bba0430b98d4e4f5cb2eacdf/
Complete output (64 lines):
running bdist_wheel
running build
running build_py
creating build
creating build/lib.macosx-11.0-arm64-3.9
creating build/lib.macosx-11.0-arm64-3.9/tomotopy
copying tomotopy/_version.py -> build/lib.macosx-11.0-arm64-3.9/tomotopy
copying tomotopy/coherence.py -> build/lib.macosx-11.0-arm64-3.9/tomotopy
copying tomotopy/init.py -> build/lib.macosx-11.0-arm64-3.9/tomotopy
copying tomotopy/_summary.py -> build/lib.macosx-11.0-arm64-3.9/tomotopy
copying tomotopy/utils.py -> build/lib.macosx-11.0-arm64-3.9/tomotopy
copying tomotopy/label.py -> build/lib.macosx-11.0-arm64-3.9/tomotopy
running egg_info
writing tomotopy.egg-info/PKG-INFO
writing dependency_links to tomotopy.egg-info/dependency_links.txt
writing requirements to tomotopy.egg-info/requires.txt
writing top-level names to tomotopy.egg-info/top_level.txt
reading manifest file 'tomotopy.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
warning: no files found matching 'LICENSE.txt'
writing manifest file 'tomotopy.egg-info/SOURCES.txt'
copying tomotopy/auto_labeling_code.rst -> build/lib.macosx-11.0-arm64-3.9/tomotopy
copying tomotopy/auto_labeling_code_with_porter.rst -> build/lib.macosx-11.0-arm64-3.9/tomotopy
copying tomotopy/documentation.kr.rst -> build/lib.macosx-11.0-arm64-3.9/tomotopy
copying tomotopy/documentation.rst -> build/lib.macosx-11.0-arm64-3.9/tomotopy
running build_ext
building '_tomotopy' extension
creating build/temp.macosx-11.0-arm64-3.9
creating build/temp.macosx-11.0-arm64-3.9/src
creating build/temp.macosx-11.0-arm64-3.9/src/python
clang -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -fwrapv -O2 -Wall -fPIC -O2 -isystem /Users/sgreene/miniforge3/include -arch arm64 -fPIC -O2 -isystem /Users/sgreene/miniforge3/include -arch arm64 -Iinclude -I/Users/sgreene/miniforge3/lib/python3.9/site-packages/numpy/core/include -I/Users/sgreene/miniforge3/include/python3.9 -c src/python/py_rt.cpp -o build/temp.macosx-11.0-arm64-3.9/src/python/py_rt.o -std=c++1y -O3 -fpermissive -stdlib=libc++ -Wno-unused-variable -Wno-switch
In file included from src/python/py_rt.cpp:25:
/Library/Developer/CommandLineTools/usr/lib/clang/13.0.0/include/cpuid.h:14:2: error: this header is for x86 only
#error this header is for x86 only
^
/Library/Developer/CommandLineTools/usr/lib/clang/13.0.0/include/cpuid.h:286:5: error: invalid output constraint '=a' in asm
cpuid(leaf, eax, ebx, ecx, edx);
^
/Library/Developer/CommandLineTools/usr/lib/clang/13.0.0/include/cpuid.h:251:11: note: expanded from macro 'cpuid'
: "=a"(eax), "=r" (ebx), "=c"(ecx), "=d"(edx)
^
/Library/Developer/CommandLineTools/usr/lib/clang/13.0.0/include/cpuid.h:301:5: error: invalid output constraint '=a' in asm
cpuid(leaf, eax, ebx, ecx, edx);
^
/Library/Developer/CommandLineTools/usr/lib/clang/13.0.0/include/cpuid.h:251:11: note: expanded from macro 'cpuid'
: "=a"(eax), "=r" (ebx), "=c"(ecx), "=d"(edx)
^
/Library/Developer/CommandLineTools/usr/lib/clang/13.0.0/include/cpuid.h:315:5: error: invalid output constraint '=a' in asm
__cpuid_count(leaf, subleaf, eax, ebx, ecx, edx);
^
/Library/Developer/CommandLineTools/usr/lib/clang/13.0.0/include/cpuid.h:258:11: note: expanded from macro '__cpuid_count'
: "=a"(eax), "=r" (ebx), "=c"(ecx), "=d"(edx)
^
src/python/py_rt.cpp:30:34: error: invalid output constraint '=a' in asm
asm volatile("xgetbv" : "=a"(eax), "=d"(edx) : "c"(index));
^
src/python/py_rt.cpp:38:2: error: invalid output constraint '=a' in asm
__cpuid_count(InfoType, 0, info[0], info[1], info[2], info[3]);
^
/Library/Developer/CommandLineTools/usr/lib/clang/13.0.0/include/cpuid.h:258:11: note: expanded from macro '__cpuid_count'
: "=a"(eax), "=r" (ebx), "=c"(ecx), "=d"(edx)
^
6 errors generated.
error: command '/usr/bin/clang' failed with exit code 1

ERROR: Failed building wheel for tomotopy
Running setup.py clean for tomotopy
Failed to build tomotopy
Installing collected packages: tomotopy
Running setup.py install for tomotopy ... error
ERROR: Command errored out with exit status 1:
command: /Users/sgreene/miniforge3/bin/python3.9 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/private/var/folders/11/29tzm_tx4cd3p3rprtfq9kmc0000gn/T/pip-install-zbbc7pzy/tomotopy_f5103692bba0430b98d4e4f5cb2eacdf/setup.py'"'"'; file='"'"'/private/var/folders/11/29tzm_tx4cd3p3rprtfq9kmc0000gn/T/pip-install-zbbc7pzy/tomotopy_f5103692bba0430b98d4e4f5cb2eacdf/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(file) if os.path.exists(file) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, file, '"'"'exec'"'"'))' install --record /private/var/folders/11/29tzm_tx4cd3p3rprtfq9kmc0000gn/T/pip-record-1njwyoak/install-record.txt --single-version-externally-managed --compile --install-headers /Users/sgreene/miniforge3/include/python3.9/tomotopy
cwd: /private/var/folders/11/29tzm_tx4cd3p3rprtfq9kmc0000gn/T/pip-install-zbbc7pzy/tomotopy_f5103692bba0430b98d4e4f5cb2eacdf/
Complete output (64 lines):
running install
running build
running build_py
creating build
creating build/lib.macosx-11.0-arm64-3.9
creating build/lib.macosx-11.0-arm64-3.9/tomotopy
copying tomotopy/_version.py -> build/lib.macosx-11.0-arm64-3.9/tomotopy
copying tomotopy/coherence.py -> build/lib.macosx-11.0-arm64-3.9/tomotopy
copying tomotopy/init.py -> build/lib.macosx-11.0-arm64-3.9/tomotopy
copying tomotopy/_summary.py -> build/lib.macosx-11.0-arm64-3.9/tomotopy
copying tomotopy/utils.py -> build/lib.macosx-11.0-arm64-3.9/tomotopy
copying tomotopy/label.py -> build/lib.macosx-11.0-arm64-3.9/tomotopy
running egg_info
writing tomotopy.egg-info/PKG-INFO
writing dependency_links to tomotopy.egg-info/dependency_links.txt
writing requirements to tomotopy.egg-info/requires.txt
writing top-level names to tomotopy.egg-info/top_level.txt
reading manifest file 'tomotopy.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
warning: no files found matching 'LICENSE.txt'
writing manifest file 'tomotopy.egg-info/SOURCES.txt'
copying tomotopy/auto_labeling_code.rst -> build/lib.macosx-11.0-arm64-3.9/tomotopy
copying tomotopy/auto_labeling_code_with_porter.rst -> build/lib.macosx-11.0-arm64-3.9/tomotopy
copying tomotopy/documentation.kr.rst -> build/lib.macosx-11.0-arm64-3.9/tomotopy
copying tomotopy/documentation.rst -> build/lib.macosx-11.0-arm64-3.9/tomotopy
running build_ext
building '_tomotopy' extension
creating build/temp.macosx-11.0-arm64-3.9
creating build/temp.macosx-11.0-arm64-3.9/src
creating build/temp.macosx-11.0-arm64-3.9/src/python
clang -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -fwrapv -O2 -Wall -fPIC -O2 -isystem /Users/sgreene/miniforge3/include -arch arm64 -fPIC -O2 -isystem /Users/sgreene/miniforge3/include -arch arm64 -Iinclude -I/Users/sgreene/miniforge3/lib/python3.9/site-packages/numpy/core/include -I/Users/sgreene/miniforge3/include/python3.9 -c src/python/py_rt.cpp -o build/temp.macosx-11.0-arm64-3.9/src/python/py_rt.o -std=c++1y -O3 -fpermissive -stdlib=libc++ -Wno-unused-variable -Wno-switch
In file included from src/python/py_rt.cpp:25:
/Library/Developer/CommandLineTools/usr/lib/clang/13.0.0/include/cpuid.h:14:2: error: this header is for x86 only
#error this header is for x86 only
^
/Library/Developer/CommandLineTools/usr/lib/clang/13.0.0/include/cpuid.h:286:5: error: invalid output constraint '=a' in asm
__cpuid(__leaf, __eax, __ebx, __ecx, __edx);
^
/Library/Developer/CommandLineTools/usr/lib/clang/13.0.0/include/cpuid.h:251:11: note: expanded from macro '__cpuid'
: "=a"(__eax), "=r" (__ebx), "=c"(__ecx), "=d"(__edx)
^
/Library/Developer/CommandLineTools/usr/lib/clang/13.0.0/include/cpuid.h:301:5: error: invalid output constraint '=a' in asm
__cpuid(__leaf, *__eax, *__ebx, *__ecx, *__edx);
^
/Library/Developer/CommandLineTools/usr/lib/clang/13.0.0/include/cpuid.h:251:11: note: expanded from macro '__cpuid'
: "=a"(__eax), "=r" (__ebx), "=c"(__ecx), "=d"(__edx)
^
/Library/Developer/CommandLineTools/usr/lib/clang/13.0.0/include/cpuid.h:315:5: error: invalid output constraint '=a' in asm
__cpuid_count(__leaf, __subleaf, *__eax, *__ebx, *__ecx, *__edx);
^
/Library/Developer/CommandLineTools/usr/lib/clang/13.0.0/include/cpuid.h:258:11: note: expanded from macro '__cpuid_count'
: "=a"(__eax), "=r" (__ebx), "=c"(__ecx), "=d"(__edx)
^
src/python/py_rt.cpp:30:34: error: invalid output constraint '=a' in asm
asm volatile("xgetbv" : "=a"(eax), "=d"(edx) : "c"(index));
^
src/python/py_rt.cpp:38:2: error: invalid output constraint '=a' in asm
__cpuid_count(InfoType, 0, info[0], info[1], info[2], info[3]);
^
/Library/Developer/CommandLineTools/usr/lib/clang/13.0.0/include/cpuid.h:258:11: note: expanded from macro '__cpuid_count'
: "=a"(__eax), "=r" (__ebx), "=c"(__ecx), "=d"(__edx)
^
6 errors generated.
error: command '/usr/bin/clang' failed with exit code 1
----------------------------------------
ERROR: Command errored out with exit status 1: /Users/sgreene/miniforge3/bin/python3.9 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/private/var/folders/11/29tzm_tx4cd3p3rprtfq9kmc0000gn/T/pip-install-zbbc7pzy/tomotopy_f5103692bba0430b98d4e4f5cb2eacdf/setup.py'"'"'; file='"'"'/private/var/folders/11/29tzm_tx4cd3p3rprtfq9kmc0000gn/T/pip-install-zbbc7pzy/tomotopy_f5103692bba0430b98d4e4f5cb2eacdf/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(file) if os.path.exists(file) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, file, '"'"'exec'"'"'))' install --record /private/var/folders/11/29tzm_tx4cd3p3rprtfq9kmc0000gn/T/pip-record-1njwyoak/install-record.txt --single-version-externally-managed --compile --install-headers /Users/sgreene/miniforge3/include/python3.9/tomotopy Check the logs for full command output.

bab2min · 2021-12-10T10:08:55Z

Hi @stephangreene ,
Currently, tomotopy don't support Apple Silicon M1.
I am working on M1 support, but this may takes some time.
Please use Rosetta until M1 is fully supported.

stephangreene · 2021-12-15T22:35:46Z

Thanks @bab2min I appreciate the effort on this. Look forward to trying it out when ready.

jsigman · 2022-10-20T19:40:24Z

Same here, thanks @bab2min

soonernotfaster · 2022-12-19T19:16:26Z

@bab2min, how can I help add M1 support?

Support for macOS ARM64 arch (#153)

bab2min · 2023-01-22T18:23:02Z

@stephangreene @steven-solomon @jsigman
Finally, I got a new mac with M1 chip and fixed the error. You can install tomotopy v0.12.4 at macOS with Apple Silicon.

bab2min added the enhancement New feature or request label Mar 21, 2022

bab2min mentioned this issue Jun 23, 2022

Mac M1 cpuid installation error #170

Closed

Dobatymo mentioned this issue Jan 18, 2023

Error with headers when installing with pip #192

Closed

bab2min added a commit that referenced this issue Jan 21, 2023

Merge pull request #193 from bab2min/dev_neon

ec8b828

Support for macOS ARM64 arch (#153)

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Support for Apple Silicon M1 #153

Support for Apple Silicon M1 #153

stephangreene commented Dec 9, 2021

bab2min commented Dec 10, 2021

stephangreene commented Dec 15, 2021 •

edited

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jsigman commented Oct 20, 2022

soonernotfaster commented Dec 19, 2022

bab2min commented Jan 22, 2023

Support for Apple Silicon M1 #153

Support for Apple Silicon M1 #153

Comments

stephangreene commented Dec 9, 2021

bab2min commented Dec 10, 2021

stephangreene commented Dec 15, 2021 • edited Loading

jsigman commented Oct 20, 2022

soonernotfaster commented Dec 19, 2022

bab2min commented Jan 22, 2023

stephangreene commented Dec 15, 2021 •

edited

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