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Releases: axbazin/synta

synta 0.2.10

27 Mar 16:13
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  • contigs are ordered by size in the gff file
  • There is a tmp option to change the temporary directory
  • default tmp directory is now the OS default tmp instead of /dev/shm (for macOS compatibility)

Synta 0.2.9

10 Feb 16:37
9f0b1dd
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  • can now write to the gbff format
  • do not remove character '.' if provided as a basename
  • do not write non-CDS genes in .faa file

v0.2.5

29 Aug 15:10
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showling help when calling 'synta' alone. Added the __init__ files.

v0.2.3

29 Aug 14:20
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Initial release of synta, a syntaxic annotation pipeline for prokaryotic genomes.

Annotates CDS, rRNA and tRNA genes.

Have either fasta of genbank file format as input. It only needs to have the sequences but it can also have other informations (they will be ignored though).

Customize file output (gff, fna, faa and ffn file formats are supported).