Matlab release 2.4

ToolboxPackagingConfiguration.prj

@@ -1,5 +1,5 @@
 <deployment-project plugin="plugin.toolbox" plugin-version="1.0">
-  <configuration build-checksum="770107251" file="/Users/famille/dev/libraries/at/ToolboxPackagingConfiguration.prj" location="/Users/famille/dev/libraries/at" name="ToolboxPackagingConfiguration" target="target.toolbox" target-name="Package Toolbox">
+  <configuration build-checksum="1932690665" file="/Users/famille/dev/libraries/at/ToolboxPackagingConfiguration.prj" location="/Users/famille/dev/libraries/at" name="ToolboxPackagingConfiguration" target="target.toolbox" target-name="Package Toolbox">
     <param.appname>Accelerator Toolbox</param.appname>
     <param.authnamewatermark>atcollab</param.authnamewatermark>
     <param.email />
@@ -16,7 +16,7 @@ AT is based on a 6-D modular tracking engine written in C/C++ for efficiency. La
 
 View on GitHub</param.description>
     <param.screenshot>${PROJECT_ROOT}/developer/matlab/AT.png</param.screenshot>
-    <param.version>2.3</param.version>
+    <param.version>2.4</param.version>
     <param.output>${PROJECT_ROOT}/Accelerator Toolbox.mltbx</param.output>
     <param.products.name />
     <param.products.id />
@@ -80,6 +80,7 @@ docs/Makefile</param.exclude.filters>
     <param.getting.started.guide />
     <param.matlabpath.excludes>
       <item>/</item>
+      <item>/developer/matlab</item>
     </param.matlabpath.excludes>
     <param.javaclasspath.excludes>
       <item>/docs/vendor/bundle/ruby/2.6.0/gems/concurrent-ruby-1.1.9/lib/concurrent-ruby/concurrent/concurrent_ruby.jar</item>
@@ -167,7 +168,7 @@ docs/Makefile</param.exclude.filters>
       <vista>false</vista>
       <linux>false</linux>
       <solaris>false</solaris>
-      <osver>12.4</osver>
+      <osver>12.5.1</osver>
       <os32>false</os32>
       <os64>true</os64>
       <arch>maci64</arch>

atmat/Contents.m

@@ -1,5 +1,5 @@
 % Accelerator Toolbox
-% Version 2.4-dev443 (atcollab) 20-Jul-2022
+% Version 2.4 (atcollab) 05-Sep-2022
 %
 %   atdiag           - Tests AT intallation
 %   atdisplay        - checks the verbosity level in the global variable GLOBVAL

atmat/at.m

@@ -1,5 +1,5 @@
 % Accelerator Toolbox
-% Version 2.4-dev443 (atcollab) 20-Jul-2022
+% Version 2.4 (atcollab) 05-Sep-2022
 %
 % The Accelerator Toolbox was originally created by Andrei Terebilo.
 % Development is now continued by a multi-laboratory collaboration, <a href="matlab:web('https://github.com/atcollab')">atcollab</a>
@@ -140,4 +140,4 @@
 %
 %       <a href="matlab:help symplectify">symplectify</a>              - Makes a matrix more symplectic
 %
-%<a href="matlab:web('/Applications/MATLAB_R2021a.app/help/3ptoolbox/atacceleratortoolbox/doc/AT_page.html')">See documentation for AT</a>
+%<a href="matlab:web('/Applications/MATLAB_R2022a.app/help/3ptoolbox/atacceleratortoolbox/doc/AT_page.html')">See documentation for AT</a>

developer/matlab/atrelease.m

@@ -46,7 +46,7 @@ function atrelease()
 
 %Build doc search database
 try
-    builddocsearchdb(fullfile(rootdir,'docs','matlab'));
+    builddocsearchdb(fullfile(rootdir,'docs','atdocs','matlab'));
 catch me
     warning( me.message )
 end

developer/matlab/gen_toc.m

@@ -2,7 +2,7 @@ function gen_toc()
 %GEN_TOC	Build the HTML files used by the Matlab help browser
 
 [devdir,~, ~]=fileparts(mfilename('fullpath'));
-docdir = fullfile(atroot,'..','docs','matlab');
+docdir = fullfile(atroot,'..','docs','atdocs','matlab');
 tocfile = fullfile(docdir,'helptoc.xml');
 [fid,fmess,fmid] = copyfile(fullfile(devdir,'helptoc.xml'),tocfile);
 if fid <= 0
@@ -11,14 +11,14 @@ function gen_toc()
 fid=openmfile(tocfile,'at');
 
 % User guide
-ugname=fullfile('m','ugsummary.m');
+ugname=fullfile(devdir,'m','ugsummary.m');
 hid=openmfile(ugname,'wt');
 fprintf(fid,'        <tocitem target="ugsummary.html"\n');
 fprintf(fid,'            image="HelpIcon.USER_GUIDE">AT User Guide\n');
 fprintf(hid,'%%%% AT User Guide\n%%\n%%%%\n');
 %   Loop on UG chapters
 for m=atchapters()
-    mname = fullfile('m', m.id+".m");
+    mname = fullfile(devdir,'m', m.id+".m");
     fprintf(hid,'%% <matlab:web(fullfile(docroot,''3ptoolbox'',''atacceleratortoolbox'',''doc'',''%s.html'')) %s>\n%%\n',m.id,m.title);
     fprintf(fid,'            <tocitem target="%s.html">%s</tocitem>\n',m.id,m.title);
     gid=openmfile(mname,'wt');
@@ -85,7 +85,7 @@ function mlxloop(secdir,secname,chapfun)
         fprintf(sumid,'%%%% %s\n%% \n%%%%\n', secname);
         for mm=chapfun()
             target=fullfile(secdir,mm.id+".html");
-            export(fullfile(secdir,mm.id+".mlx"),fullfile(docdir,target));
+            export(fullfile(devdir,secdir,mm.id+".mlx"),fullfile(docdir,target));
             fprintf(sumid,'%% <matlab:web(fullfile(docroot,''3ptoolbox'',''atacceleratortoolbox'',''doc'',''%s'')) %s>\n%%\n',target,mm.title);
             fprintf(fid,'            <tocitem target="%s">%s</tocitem>\n',target,mm.title);
         end
@@ -96,7 +96,7 @@ function mlxloop(secdir,secname,chapfun)
         function res=lst()
             vals=reshape(dir(fullfile(dirname,'*.mlx')),1,[]);
             [~,nms,~]=arrayfun(@fileparts,{vals.name},'UniformOutput',false);
-            nms=string(sort(nms));
+            nms=cellfun(@string,sort(nms),'UniformOutput',false);
             res=struct('id',nms,'title',nms);
         end
     end

docs/atdocs/matlab/atelemcreate.html

@@ -6,7 +6,7 @@
    <!--
 This HTML was auto-generated from MATLAB code.
 To make changes, update the MATLAB code and republish this document.
-      --><title>Element creation</title><meta name="generator" content="MATLAB 9.12"><link rel="schema.DC" href="http://purl.org/dc/elements/1.1/"><meta name="DC.date" content="2022-04-01"><meta name="DC.source" content="atelemcreate.m"><style type="text/css">
+      --><title>Element creation</title><meta name="generator" content="MATLAB 9.12"><link rel="schema.DC" href="http://purl.org/dc/elements/1.1/"><meta name="DC.date" content="2022-09-05"><meta name="DC.source" content="atelemcreate.m"><style type="text/css">
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 html { min-height:100%; margin-bottom:1px; }

docs/atdocs/matlab/atelemfuncs.html

@@ -6,7 +6,7 @@
    <!--
 This HTML was auto-generated from MATLAB code.
 To make changes, update the MATLAB code and republish this document.
-      --><title>Element manipulation</title><meta name="generator" content="MATLAB 9.12"><link rel="schema.DC" href="http://purl.org/dc/elements/1.1/"><meta name="DC.date" content="2022-04-01"><meta name="DC.source" content="atelemfuncs.m"><style type="text/css">
+      --><title>Element manipulation</title><meta name="generator" content="MATLAB 9.12"><link rel="schema.DC" href="http://purl.org/dc/elements/1.1/"><meta name="DC.date" content="2022-09-05"><meta name="DC.source" content="atelemfuncs.m"><style type="text/css">
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 html { min-height:100%; margin-bottom:1px; }

docs/atdocs/matlab/atlatticefuncs.html

@@ -6,7 +6,7 @@
    <!--
 This HTML was auto-generated from MATLAB code.
 To make changes, update the MATLAB code and republish this document.
-      --><title>Lattice manipulation</title><meta name="generator" content="MATLAB 9.12"><link rel="schema.DC" href="http://purl.org/dc/elements/1.1/"><meta name="DC.date" content="2022-04-01"><meta name="DC.source" content="atlatticefuncs.m"><style type="text/css">
+      --><title>Lattice manipulation</title><meta name="generator" content="MATLAB 9.12"><link rel="schema.DC" href="http://purl.org/dc/elements/1.1/"><meta name="DC.date" content="2022-09-05"><meta name="DC.source" content="atlatticefuncs.m"><style type="text/css">
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 html { min-height:100%; margin-bottom:1px; }

docs/atdocs/matlab/atlinearoptics.html

@@ -6,7 +6,7 @@
    <!--
 This HTML was auto-generated from MATLAB code.
 To make changes, update the MATLAB code and republish this document.
-      --><title>Linear optics</title><meta name="generator" content="MATLAB 9.12"><link rel="schema.DC" href="http://purl.org/dc/elements/1.1/"><meta name="DC.date" content="2022-04-01"><meta name="DC.source" content="atlinearoptics.m"><style type="text/css">
+      --><title>Linear optics</title><meta name="generator" content="MATLAB 9.12"><link rel="schema.DC" href="http://purl.org/dc/elements/1.1/"><meta name="DC.date" content="2022-09-05"><meta name="DC.source" content="atlinearoptics.m"><style type="text/css">
 html,body,div,span,applet,object,iframe,h1,h2,h3,h4,h5,h6,p,blockquote,pre,a,abbr,acronym,address,big,cite,code,del,dfn,em,font,img,ins,kbd,q,s,samp,small,strike,strong,tt,var,b,u,i,center,dl,dt,dd,ol,ul,li,fieldset,form,label,legend,table,caption,tbody,tfoot,thead,tr,th,td{margin:0;padding:0;border:0;outline:0;font-size:100%;vertical-align:baseline;background:transparent}body{line-height:1}ol,ul{list-style:none}blockquote,q{quotes:none}blockquote:before,blockquote:after,q:before,q:after{content:'';content:none}:focus{outine:0}ins{text-decoration:none}del{text-decoration:line-through}table{border-collapse:collapse;border-spacing:0}
 
 html { min-height:100%; margin-bottom:1px; }

docs/atdocs/matlab/atloadsave.html

@@ -6,7 +6,7 @@
    <!--
 This HTML was auto-generated from MATLAB code.
 To make changes, update the MATLAB code and republish this document.
-      --><title>Loading and Saving lattices</title><meta name="generator" content="MATLAB 9.12"><link rel="schema.DC" href="http://purl.org/dc/elements/1.1/"><meta name="DC.date" content="2022-04-01"><meta name="DC.source" content="atloadsave.m"><style type="text/css">
+      --><title>Loading and Saving lattices</title><meta name="generator" content="MATLAB 9.12"><link rel="schema.DC" href="http://purl.org/dc/elements/1.1/"><meta name="DC.date" content="2022-09-05"><meta name="DC.source" content="atloadsave.m"><style type="text/css">
 html,body,div,span,applet,object,iframe,h1,h2,h3,h4,h5,h6,p,blockquote,pre,a,abbr,acronym,address,big,cite,code,del,dfn,em,font,img,ins,kbd,q,s,samp,small,strike,strong,tt,var,b,u,i,center,dl,dt,dd,ol,ul,li,fieldset,form,label,legend,table,caption,tbody,tfoot,thead,tr,th,td{margin:0;padding:0;border:0;outline:0;font-size:100%;vertical-align:baseline;background:transparent}body{line-height:1}ol,ul{list-style:none}blockquote,q{quotes:none}blockquote:before,blockquote:after,q:before,q:after{content:'';content:none}:focus{outine:0}ins{text-decoration:none}del{text-decoration:line-through}table{border-collapse:collapse;border-spacing:0}
 
 html { min-height:100%; margin-bottom:1px; }

docs/atdocs/matlab/atphysics.html

@@ -6,7 +6,7 @@
    <!--
 This HTML was auto-generated from MATLAB code.
 To make changes, update the MATLAB code and republish this document.
-      --><title>Physics</title><meta name="generator" content="MATLAB 9.12"><link rel="schema.DC" href="http://purl.org/dc/elements/1.1/"><meta name="DC.date" content="2022-04-01"><meta name="DC.source" content="atphysics.m"><style type="text/css">
+      --><title>Physics</title><meta name="generator" content="MATLAB 9.12"><link rel="schema.DC" href="http://purl.org/dc/elements/1.1/"><meta name="DC.date" content="2022-09-05"><meta name="DC.source" content="atphysics.m"><style type="text/css">
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 html { min-height:100%; margin-bottom:1px; }

docs/atdocs/matlab/atradiation.html

@@ -6,7 +6,7 @@
    <!--
 This HTML was auto-generated from MATLAB code.
 To make changes, update the MATLAB code and republish this document.
-      --><title>Radiation</title><meta name="generator" content="MATLAB 9.12"><link rel="schema.DC" href="http://purl.org/dc/elements/1.1/"><meta name="DC.date" content="2022-04-01"><meta name="DC.source" content="atradiation.m"><style type="text/css">
+      --><title>Radiation</title><meta name="generator" content="MATLAB 9.12"><link rel="schema.DC" href="http://purl.org/dc/elements/1.1/"><meta name="DC.date" content="2022-09-05"><meta name="DC.source" content="atradiation.m"><style type="text/css">
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 html { min-height:100%; margin-bottom:1px; }

docs/atdocs/matlab/atsummary.html

@@ -6,7 +6,7 @@
    <!--
 This HTML was auto-generated from MATLAB code.
 To make changes, update the MATLAB code and republish this document.
-      --><title>Parameter summary</title><meta name="generator" content="MATLAB 9.12"><link rel="schema.DC" href="http://purl.org/dc/elements/1.1/"><meta name="DC.date" content="2022-04-01"><meta name="DC.source" content="atsummary.m"><style type="text/css">
+      --><title>Parameter summary</title><meta name="generator" content="MATLAB 9.12"><link rel="schema.DC" href="http://purl.org/dc/elements/1.1/"><meta name="DC.date" content="2022-09-05"><meta name="DC.source" content="atsummary.m"><style type="text/css">
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 html { min-height:100%; margin-bottom:1px; }

docs/atdocs/matlab/custom_toolbox.json

@@ -1 +1 @@
-{"Name":"AT: Accelerator Toolbox","ShortName":"at__accelerator_toolbox","ID":"3ptoolbox::at__accelerator_toolbox","ToolboxHelpLocations":[{"ContentType":"doc","LocationOnDisk":"/Users/famille/dev/libraries/at/docs/matlab","AbsolutePath":"/Users/famille/dev/libraries/at/atmat/info.xml","HelpLocation":"3ptoolbox/atacceleratortoolbox/doc"},{"ContentType":"example","LocationOnDisk":"/Users/famille/dev/libraries/at/atmat","AbsolutePath":"/Users/famille/dev/libraries/at/atmat/demos.xml","HelpLocation":"3ptoolbox/atacceleratortoolbox/example"}]}
+{"Name":"AT: Accelerator Toolbox","ShortName":"at__accelerator_toolbox","ID":"3ptoolbox::at__accelerator_toolbox","ToolboxHelpLocations":[{"ContentType":"doc","LocationOnDisk":"/Users/famille/dev/libraries/at/docs/atdocs/matlab","AbsolutePath":"/Users/famille/dev/libraries/at/atmat/info.xml","HelpLocation":"3ptoolbox/atacceleratortoolbox/doc"},{"ContentType":"example","LocationOnDisk":"/Users/famille/dev/libraries/at/atmat","AbsolutePath":"/Users/famille/dev/libraries/at/atmat/demos.xml","HelpLocation":"3ptoolbox/atacceleratortoolbox/example"}]}

docs/atdocs/matlab/helptoc.xml

@@ -49,6 +49,7 @@
                  image="$toolbox/matlab/icons/webicon.gif">
         Release notes
             <tocitem target="release_notes/r2.3.html">r2.3</tocitem>
+            <tocitem target="release_notes/r2.4.html">r2.4</tocitem>
         </tocitem>
         <tocitem target="https://atcollab.github.io/at/" 
                  image="$toolbox/matlab/icons/webicon.gif">

docs/atdocs/matlab/howtos.html

@@ -6,7 +6,7 @@
    <!--
 This HTML was auto-generated from MATLAB code.
 To make changes, update the MATLAB code and republish this document.
-      --><title>How to&#8230;</title><meta name="generator" content="MATLAB 9.12"><link rel="schema.DC" href="http://purl.org/dc/elements/1.1/"><meta name="DC.date" content="2022-04-01"><meta name="DC.source" content="howtos.m"><style type="text/css">
+      --><title>How to&#8230;</title><meta name="generator" content="MATLAB 9.12"><link rel="schema.DC" href="http://purl.org/dc/elements/1.1/"><meta name="DC.date" content="2022-09-05"><meta name="DC.source" content="howtos.m"><style type="text/css">
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 html { min-height:100%; margin-bottom:1px; }