GitHub - andreyto/mr-mpi-blast: Parallel implementation of NCBI BLAST+ with MapReduce-MPI

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Name		Name	Last commit message	Last commit date
Latest commit History 89 Commits
doc		doc
examples		examples
mrmpi		mrmpi
tools		tools
tutorial		tutorial
.gitignore		.gitignore
COPYING		COPYING
LICENSE.GPLv3.html		LICENSE.GPLv3.html
Makefile.in		Makefile.in
Makefile.mrblast.app		Makefile.mrblast.app
Makefile.mrblast_install.in		Makefile.mrblast_install.in
README		README
blast_app_util.hpp		blast_app_util.hpp
mrblast.cpp		mrblast.cpp
mrblast.hpp		mrblast.hpp

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README


Updated: 1/27/2012
By Seung-Jin Sul ([email protected])


This is introductory README for the mr-mpi-blast program. For details, you may 
refer the below documents:

  - doc/HOWTOBUILD: explains how to build mr-mpi-blast 
  - doc/USERGUIDE: introduces mr-mpi-blast program and how to run mr-mpi-blast and set parameters
  - tutorial/README: introduces how to run mr-mpi-blast on the XSEDE TACC Ranger cluster
  - examples/test/generic-test/README: introduces how to run mr-mpi-blast on a local machine
  - examples/test/classifier-test/README: introduces how to run mr-mpi-blast on a local machine with classifier output 
  - examples/refseq-all-vs-all/README: introduces an example of large-scale experiment