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2.1.7 - 2022.09.02

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@ale94mleon ale94mleon released this 02 Sep 14:26
· 228 commits to main since this release

Fixed

  • Bug on moldrug.fitness.vinadock during searching of MCS between Individual.mol and constraint_ref. Before was needed to manually specified the atom ids of the seed_mol that match constraint_ref, now it is not needed any more.
  • Bug during handling exception in moldrug.constraintconf.generate_conformers.
  • Bug during handling exception moldrug.constraintconf.generate_conformers in moldrug.fitness.vinadock.
  • Bug(s) when constraint docking is used on different vina versions. The output of vina is not the same and therefore moldrug.fitness.vinadock failed.

Changed

  • In case constraint = True in moldrug.fitness.vinadock, ref_smi will be the the MCF between individual.mol amd constraint_ref instead the SMILES string of constraint_ref when moldrug.constrainconf.generate_conformers is internally called.

Added

  • moldrug.fitness.get_mol_cost function.
  • Attribute genID to the generated individuals during a moldrug.utils.GA run.