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Refactor_loading_tabix#311

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alexg9010 wants to merge 10 commits intomasteral2na/methylKit:masterfrom refactor_loading_tabixal2na/methylKit:refactor_loading_tabixCopy head branch name to clipboard

+381-231

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Commits on Jan 18, 2024

• add more failing tests for loading of tabix

  alexg9010

  committed
  4559209

• extract tabix indexing into separate function

  alexg9010

  committed
  7347e8c

• refactor function readTabixHeader into parseTabixHeader

  Show description for 05ce4e9
  alexg9010

  committed
  05ce4e9

• rename function checkTabixHeader into readTabixHeader

  Show description for f155bd6
  alexg9010

  committed
  f155bd6

• introduce new function checkTabixFile

  Show description for 2bdbf55
  alexg9010

  committed
  2bdbf55

• update vignette to use new

  Show description for 327b375
  alexg9010

  committed
  327b375

• update readMethylDB to use new functions

  alexg9010

  committed
  17304b6

• refactor and update readMethylDiffDB

  alexg9010

  committed
  d70219e

• refactor and update readMethylBaseDB

  alexg9010

  committed
  5dec282

• refactor and update readMethylRawDB

  alexg9010

  committed
  ec32a5b