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em_segLib: library of functions for segmentation operations

Installation

(python=2.7)

conda install --yes --file requirements.txt or pip install -r requirements.txt

python setup.py install

Package Functions

  1. Segmentation
  • core (seg_core)
  • transformation (seg_dist)
  • evaluation (seg_eval)
  • malis weight (seg_malis)
  • utility (seg_util)
  1. Affinity
  • utility aff_util)

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  • Python 53.3%
  • C++ 44.2%
  • C 2.2%
  • Objective-C 0.3%