The threshold for clustering.strand bias determination has been loo…

…sened. + This adjustment addresses cases like `+:13, -:2` (0.87) observed in `example_flox/flox-1nt-deletion`. + Since the minor allele is particularly susceptible, further adjustments may be necessary in the future.
akikuno · Jul 22, 2024 · 5bbaa7d · 5bbaa7d
1 parent df81767
commit 5bbaa7d
Showing 1 changed file with 2 additions and 2 deletions.
diff --git a/src/DAJIN2/core/clustering/strand_bias_handler.py b/src/DAJIN2/core/clustering/strand_bias_handler.py
@@ -17,8 +17,8 @@
 """
 
 # Constants
-STRAND_BIAS_LOWER_LIMIT = 0.1
-STRAND_BIAS_UPPER_LIMIT = 0.9
+STRAND_BIAS_LOWER_LIMIT = 0.2
+STRAND_BIAS_UPPER_LIMIT = 0.8
 
 
 def is_strand_bias(path_control: Path) -> bool: