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Does CaSpER adaptable to small sample size such as 10 cells? #61

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wangteng0605 opened this issue May 31, 2021 · 0 comments
Open

Does CaSpER adaptable to small sample size such as 10 cells? #61

wangteng0605 opened this issue May 31, 2021 · 0 comments

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@wangteng0605
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Dear CaSpER developers,

Thank you for developing this helpful tool! I have two questions about this tool. First, does CaSpER adaptable to small sample size such as 10 cells of umi/SMART-seq2 platform? Second, if I don't have control samples that with normal CNVs, can I use the average/median of all samples to infer CNVs in my dataset?

Thank you so much and looking forward to your reply!

Best wishes,
WangTeng
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