Scripts accompanying Chen et al. (2023) work on modeling, visualizing and understanding FMRI hemodynamic response.
Essentially all scripts here use AFNI.
The scripts_biowulf directory contains the main processing scripts,
including:
- Checking the data
- Estimating nonlinear alignment to template space and skullstripping
with
@SSwarper - Full FMRI time series processing through regression modeling and QC
generation with
afni_proc.py
... and more.