test for flux #17

	name: Flux

	on:
	push:
	branches:
	- master
	pull_request:

	jobs:
	build:
	runs-on: ubuntu-latest

	steps:
	- name: Checkout code
	uses: actions/checkout@v4

	- name: Start Docker container
	run: \|
	docker run -itd --name flux -v `pwd`:/pydra fluxrm/flux-sched:focal-v0.28.0 flux start
	sleep 5 # Give the container some time to start

	- name: Run necessary changes in container
	run: \|
	# Install Python 3 (if not already installed)
	docker exec flux apt-get update
	docker exec flux apt-get install -y python3

	# Add Python to PATH
	docker exec flux echo 'export PATH="/home/fluxuser/.local/bin:$PATH"' >> ~/.bashrc

	# Create an alias for 'python' (pointing to 'python3')
	docker exec flux echo 'alias python=python3' >> ~/.bashrc

	# Source the updated .bashrc to apply changes
	docker exec flux source ~/.bashrc

	- name: Run pytest
	run: \|
	docker exec flux bash -c "pytest --psij=flux --color=yes -vs -n auto --psij=slurm --cov pydra --cov-config /pydra/.coveragerc --cov-report xml:/pydra/cov.xml --doctest-modules /pydra/pydra/"

	- name: Upload to codecov
	run: \|
	docker exec flux bash -c "codecov --root /pydra -f /pydra/cov.xml -F unittests"

	- name: Stop and remove Docker container
	run: docker stop flux && docker rm flux

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