working on the docker #167
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| name: bench | |
| on: | |
| workflow_dispatch: | |
| push: | |
| paths-ignore: | |
| - 'containers/**' | |
| pull_request: | |
| paths-ignore: | |
| - 'containers/**' | |
| jobs: | |
| bench-R: | |
| runs-on: ubuntu-latest | |
| env: | |
| RENV_PATHS_ROOT: ~/.local/share/renv | |
| defaults: | |
| run: | |
| working-directory: R | |
| steps: | |
| - uses: actions/checkout@v3 #now we need to install R | |
| - uses: r-lib/actions/setup-r@v2 | |
| with: | |
| r-version: '4.2.2' | |
| # we need to manually cache the packages | |
| - name: Cache R packages | |
| uses: actions/cache@v2 | |
| with: | |
| path: ${{ env.RENV_PATHS_ROOT }} | |
| key: ${{ runner.os }}-renv-${{ hashFiles('**/renv.lock') }} | |
| restore-keys: | | |
| ${{ runner.os }}-renv- | |
| - name: Restore packages | |
| shell: Rscript {0} | |
| run: | | |
| if (!requireNamespace("renv", quietly = TRUE)) install.packages("renv") | |
| renv::restore() | |
| - name: Benchmark | |
| run: Rscript -e 'source("main.R")' | |
| - run: ls | |
| - name: upload R benchmark | |
| uses: actions/upload-artifact@v3 | |
| with: | |
| name: R_benchmark | |
| path: R/benchmark_results.yaml | |
| bench-Julia: | |
| runs-on: ubuntu-latest | |
| defaults: | |
| run: | |
| working-directory: Julia | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - uses: julia-actions/setup-julia@v1 | |
| with: | |
| version: '1.9.3' | |
| - name: Benchmark | |
| run: julia --project -e 'using Pkg; Pkg.instantiate(); include("main.jl")' | |
| - run: ls | |
| - name: upload Julia benchmark | |
| uses: actions/upload-artifact@v3 | |
| with: | |
| name: Julia_benchmark | |
| path: Julia/benchmark_results.yaml | |
| bench-Python: | |
| runs-on: ubuntu-latest | |
| defaults: | |
| run: | |
| working-directory: Python | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - uses: actions/setup-python@v2 | |
| with: | |
| python-version: '3.11' | |
| - run: pip install -r requirements.txt | |
| # cache the python pip installed packages | |
| - name: Cache pip packages | |
| uses: actions/cache@v2 | |
| with: | |
| path: ~/.cache/pip | |
| key: ${{ runner.os }}-pip-${{ hashFiles('**/requirements.txt') }} | |
| restore-keys: | | |
| ${{ runner.os }}-pip- | |
| - name: Benchmark | |
| run: python main.py | |
| - run: ls | |
| - name: upload Python benchmark | |
| uses: actions/upload-artifact@v3 | |
| with: | |
| name: Python_benchmark | |
| path: Python/benchmark_results.yaml | |
| create-README: | |
| runs-on: ubuntu-latest | |
| needs: [bench-R, bench-Julia, bench-Python] | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: Download R benchmark | |
| uses: actions/download-artifact@v2 | |
| with: | |
| name: R_benchmark | |
| path: R | |
| - name: Download Julia benchmark | |
| uses: actions/download-artifact@v2 | |
| with: | |
| name: Julia_benchmark | |
| path: Julia | |
| - name: Download Python benchmark | |
| uses: actions/download-artifact@v2 | |
| with: | |
| name: Python_benchmark | |
| path: Python | |
| # SETUP python and install dependencies | |
| - uses: actions/setup-python@v2 | |
| with: | |
| python-version: '3.11' | |
| - run: pip install -r requirements.txt | |
| - run: python generate_readme.py | |
| - run: cat README.md | |
| # commit and push the README.md | |
| - name: Commit and push | |
| run: | | |
| git config --local user.email "github-actions[bot]@users.noreply.github.com" | |
| git config --local user.name "github-actions[bot]" | |
| git add . | |
| git commit -m "Bench and update README.md" | |
| git push | |
| if: github.ref == 'refs/heads/main' && github.event_name != 'pull_request' |