Add MoLFormer model to DeepChem (#4145) #7
Annotations
8 errors and 14 warnings
unit-tests (ubuntu-latest, 3.11)
The process '/home/runner/miniconda3/condabin/conda' failed with exit code 1
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unit-tests (ubuntu-latest, 3.11)
Process completed with exit code 127.
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unit-tests (windows-latest, 3.9)
The process 'C:\Users\runneradmin\miniconda3\condabin\conda.bat' failed with exit code 1
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unit-tests (windows-latest, 3.9)
Process completed with exit code 127.
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unit-tests (ubuntu-latest, 3.10)
Process completed with exit code 1.
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unit-tests (ubuntu-latest, 3.10)
Process completed with exit code 1.
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unit-tests (ubuntu-latest, 3.8)
Process completed with exit code 1.
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unit-tests (ubuntu-latest, 3.8)
Process completed with exit code 1.
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unit-tests (ubuntu-latest, 3.11)
/home/runner/miniconda3/lib/python3.12/argparse.py:2006: FutureWarning: `remote_definition` is deprecated and will be removed in 25.9. Use `conda env create --file=URL` instead.
action(self, namespace, argument_values, option_string)
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unit-tests (ubuntu-latest, 3.11)
Pip subprocess error:
Running command git clone --filter=blob:none --quiet https://github.com/diffqc/dqclibs.git /tmp/pip-req-build-jvjvjghe
Running command git clone --filter=blob:none --quiet https://github.com/hackingmaterials/matminer.git /tmp/pip-req-build-b2r7nlvo
Running command git clone --filter=blob:none --quiet https://gitlab.com/libxc/libxc.git /tmp/pip-req-build-vusy7_zy
Running command git checkout -q b8c6c04e60f2ef9825ffd5491827c8361c27afd7
error: subprocess-exited-with-error
× python setup.py egg_info did not run successfully.
│ exit code: 1
╰─> [7 lines of output]
Traceback (most recent call last):
File "<string>", line 2, in <module>
File "<pip-setuptools-caller>", line 34, in <module>
File "/tmp/pip-install-o_tcq4qz/pyscf_509cdee782a644c295e9dafa0ab6b1bf/setup.py", line 202, in <module>
np_blas = numpy.__config__.get_info('blas_opt')
^^^^^^^^^^^^^^^^^^^^^^^^^
AttributeError: module 'numpy.__config__' has no attribute 'get_info'
[end of output]
note: This error originates from a subprocess, and is likely not a problem with pip.
error: metadata-generation-failed
× Encountered error while generating package metadata.
╰─> See above for output.
note: This is an issue with the package mentioned above, not pip.
hint: See above for details.
CondaEnvException: Pip failed
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unit-tests (windows-latest, 3.9)
Terminal profiles are not available for system level installs
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unit-tests (windows-latest, 3.9)
Terminal profiles are not available for system level installs
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unit-tests (windows-latest, 3.9)
WARNING conda.common.path.windows:_path_to(100): cygpath is not available, fallback to manual path conversion
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unit-tests (windows-latest, 3.9)
WARNING conda.common.path.windows:_path_to(100): cygpath is not available, fallback to manual path conversion
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unit-tests (windows-latest, 3.9)
WARNING conda.common.path.windows:_path_to(100): cygpath is not available, fallback to manual path conversion
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unit-tests (windows-latest, 3.9)
WARNING conda.common.path.windows:_path_to(100): cygpath is not available, fallback to manual path conversion
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unit-tests (windows-latest, 3.9)
WARNING conda.common.path.windows:_path_to(100): cygpath is not available, fallback to manual path conversion
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unit-tests (windows-latest, 3.9)
C:\Users\runneradmin\miniconda3\Lib\argparse.py:2006: FutureWarning: `remote_definition` is deprecated and will be removed in 25.9. Use `conda env create --file=URL` instead.
action(self, namespace, argument_values, option_string)
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unit-tests (windows-latest, 3.9)
Pip subprocess error:
Running command git clone --filter=blob:none --quiet https://github.com/diffqc/dqclibs.git 'C:\Users\runneradmin\AppData\Local\Temp\pip-req-build-qpzc46cq'
Running command git clone --filter=blob:none --quiet https://github.com/hackingmaterials/matminer.git 'C:\Users\runneradmin\AppData\Local\Temp\pip-req-build-1kj3ixru'
Running command git clone --filter=blob:none --quiet https://gitlab.com/libxc/libxc.git 'C:\Users\runneradmin\AppData\Local\Temp\pip-req-build-ebjt11v4'
Running command git checkout -q b8c6c04e60f2ef9825ffd5491827c8361c27afd7
WARNING: The candidate selected for download or install is a yanked version: 'types-pkg-resources' candidate (version 0.1.0 at https://files.pythonhosted.org/packages/45/f1/27ccc700c598075ff2507c078a83f173154248b73bde31cbce21ff991006/types_pkg_resources-0.1.0-py2.py3-none-any.whl (from https://pypi.org/simple/types-pkg-resources/))
Reason for being yanked: Use types-setuptools instead
error: subprocess-exited-with-error
� python setup.py bdist_wheel did not run successfully.
\u2502 exit code: 1
\u2570\u2500> [55 lines of output]
0.1.1
running bdist_wheel
running build
running build_py
creating build\lib.win-amd64-cpython-39\dqclibs
copying dqclibs\api.py -> build\lib.win-amd64-cpython-39\dqclibs
copying dqclibs\_version.py -> build\lib.win-amd64-cpython-39\dqclibs
copying dqclibs\__init__.py -> build\lib.win-amd64-cpython-39\dqclibs
creating build\lib.win-amd64-cpython-39\dqclibs\libs
copying dqclibs\libs\__init__.py -> build\lib.win-amd64-cpython-39\dqclibs\libs
creating build\lib.win-amd64-cpython-39\dqclibs\tests
copying dqclibs\tests\test_libs.py -> build\lib.win-amd64-cpython-39\dqclibs\tests
copying dqclibs\tests\__init__.py -> build\lib.win-amd64-cpython-39\dqclibs\tests
copying dqclibs\_version.txt -> build\lib.win-amd64-cpython-39\dqclibs
running build_ext
cmake -SC:\Users\runneradmin\AppData\Local\Temp\pip-req-build-qpzc46cq\dqclibs\libs -Bbuild\temp.win-amd64-cpython-39\Release -DCMAKE_LIBRARY_OUTPUT_DIRECTORY=C:\Users\runneradmin\AppData\Local\Temp\pip-req-build-qpzc46cq\build\lib.win-amd64-cpython-39\dqclibs
-- Building for: Visual Studio 17 2022
CMake Deprecation Warning at CMakeLists.txt:15 (cmake_minimum_required):
Compatibility with CMake < 3.5 will be removed from a future version of
CMake.
Update the VERSION argument <min> value or use a ...<max> suffix to tell
CMake that the project does not need compatibility with older versions.
-- The C compiler identification is MSVC 19.41.34123.0
-- The CXX compiler identification is MSVC 19.41.34123.0
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working C compiler: C:/Program Files/Microsoft Visual Studio/2022/Enterprise/VC/Tools/MSVC/14.41.34120/bin/Hostx64/x64/cl.exe - skipped
-- Detecting C compile features
-- Detecting C compile features - done
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: C:/Program Files/Microsoft Visual Studio/2022/Enterprise/VC/Tools/MSVC/14.41.34120/bin/Hostx64/x64/cl.exe - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Looking for sgemm_
-- Looking for sgemm_ - not found
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Failed
-- Looking for pthread_create in pthreads
-- Looking for pthread_create in pthreads - not found
-- Looking for pthread_create in pthread
-- Looking for pthread_create in pthread - not found
-- Found Threads: TRUE
-- Could NOT find BLAS (missing: BLAS_LIBRARIES)
-- Looking for ffsll
-- Looking for ffsll - not found
CMake Error at C
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unit-tests (windows-latest, 3.9)
CondaEnvException: Pip failed
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unit-tests (ubuntu-latest, 3.10)
/home/runner/miniconda3/lib/python3.12/argparse.py:2006: FutureWarning: `remote_definition` is deprecated and will be removed in 25.9. Use `conda env create --file=URL` instead.
action(self, namespace, argument_values, option_string)
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unit-tests (ubuntu-latest, 3.8)
/home/runner/miniconda3/lib/python3.12/argparse.py:2006: FutureWarning: `remote_definition` is deprecated and will be removed in 25.9. Use `conda env create --file=URL` instead.
action(self, namespace, argument_values, option_string)
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