V1.5.1

[a-r-j]

Reference Issues/PRs

#198 #199 #200

What does this implement/fix? Explain your changes

• Adds missing MSE residue to constants
• Fixes chain id check in atomic edge construction
• Fixes incorrect deprotonation proceduce in protein graph construction

Pull Request Checklist

• Added a note about the modification or contribution to the ./CHANGELOG.md file (if applicable)
• Added appropriate unit test functions in the ./graphein/tests/* directories (if applicable)
• Modify documentation in the corresponding Jupyter Notebook under ./notebooks/ (if applicable)
• Ran python -m py.test tests/ and make sure that all unit tests pass (for small modifications, it might be sufficient to only run the specific test file, e.g., python -m py.test tests/protein/test_graphs.py)
• Checked for style issues by running black . and isort .

[codecov-commenter]

Codecov Report

Merging #201 (4d3684f) into master (8123f42) will increase coverage by 7.62%.
The diff coverage is 51.35%.

@@            Coverage Diff             @@
##           master     #201      +/-   ##
==========================================
+ Coverage   40.27%   47.89%   +7.62%     
==========================================
  Files          48       92      +44     
  Lines        2811     5502    +2691     
==========================================
+ Hits         1132     2635    +1503     
- Misses       1679     2867    +1188     

Impacted Files	Coverage Δ
graphein/grn/parse_trrust.py	37.77% <ø> (ø)
graphein/ml/diffusion.py	0.00% <0.00%> (ø)
graphein/ppi/edges.py	100.00% <ø> (ø)
graphein/ppi/graph_metadata.py	0.00% <ø> (ø)
graphein/ppi/graphs.py	54.34% <ø> (ø)
graphein/ppi/parse_biogrid.py	75.00% <ø> (ø)
graphein/ppi/visualisation.py	0.00% <0.00%> (ø)
graphein/protein/analysis.py	0.00% <0.00%> (ø)
graphein/protein/edges/intramolecular.py	22.68% <0.00%> (ø)
graphein/protein/features/sequence/utils.py	28.00% <0.00%> (+3.00%)	⬆️
... and 79 more

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[sonarcloud]

Kudos, SonarCloud Quality Gate passed!   

0 Bugs
0 Vulnerabilities
0 Security Hotspots
0 Code Smells

No Coverage information
0.0% Duplication

[a-r-j]

LGTM :)