Merge pull request #272 from VariantEffect/release-2024.4.0

Release 2024.4.0

package.json

@@ -1,6 +1,6 @@
 {
   "name": "mavedb-ui",
-  "version": "2024.3.0",
+  "version": "2024.4.0",
   "private": true,
   "scripts": {
     "build": "vite build --mode=${MODE=live}",

src/components/screens/ScoreSetCreator.vue

@@ -1258,15 +1258,6 @@ export default {
       }
     },
 
-    suggestionsForAutocomplete: function (suggestions) {
-      // The PrimeVue AutoComplete doesn't seem to like it if we set the suggestion list to [].
-      // This causes the drop-down to stop appearing when we later populate the list.
-      if (!suggestions || suggestions.length == 0) {
-        return [{}]
-      }
-      return suggestions
-    },
-
     validateWizardStep: function(step) {
       // Later, this may depend on server-side validation.
       switch (step) {

src/components/screens/ScoreSetView.vue

@@ -3,7 +3,7 @@
     <div v-if="itemStatus=='Loaded'" class="mave-score-set">
       <div class="mave-1000px-col">
         <div v-if="!item.publishedDate" class="variant-processing-status">
-          <div v-if="item.processingState == 'success'">
+          <div v-if="item.processingState == 'success' && item.mappingState != 'processing' && item.mappingState != 'pending_variant_processing' && item.mappingState != 'queued'">
             <Message severity="success">
               Scores and/or counts have been successfully processed. This score set is ready to be published.
             </Message>
@@ -13,6 +13,11 @@
                 Scores and/or counts are being processed. Refresh this page in a few minutes to check on their status.
             </Message>
           </div>
+          <div v-else-if="item.processingState == 'success' && (item.mappingState == 'pending_variant_processing' || item.mappingState == 'processing' || item.mappingState == 'queued')">
+            <Message severity="info">
+              Variants are being mapped to a reference. Refresh this page in a few minutes to check on their status.
+            </Message>
+          </div>
           <div v-else-if="item.processingState == 'failed'">
             <Message severity="error">
                   Failed to process score and/or count data: {{ item.processingErrors.exception }}. If there were issues with validation of individual variants, they will appear in the `Variants` section of this page.
@@ -24,6 +29,25 @@
             </Message>
           </div>
         </div>
+        <div class="mave-1000px-col">
+          <div v-if="!item.publishedDate && item.processingState == 'success' && item.mappingState != 'pending_variant_processing' && item.mappingState != 'processing' && item.mappingState != 'queued'" class="mapping-status">
+            <div v-if="item.mappingState == 'complete'">
+              <Message severity="info">
+                All variants mapped successfully to reference.
+              </Message>
+            </div>
+            <div v-else-if="item.mappingState == 'incomplete'">
+              <Message severity="info">
+                Variant mapping completed, but some variants did not map successfully. The mapped variants file available on this page includes specific error messages for each failed variant mapping. Score set is still publishable.
+              </Message>
+            </div>
+            <div v-else-if="item.mappingState == 'failed'">
+              <Message severity="info">
+                Variants could not be mapped to reference: {{  item.mappingErrors.error_message }}. This score set is still publishable.
+              </Message>
+            </div>
+          </div>
+        </div>
         <div class="mave-screen-title-bar">
           <div class="mave-screen-title">{{ item.title || 'Untitled score set' }}</div>
           <div v-if="userIsAuthenticated">