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Add workflow projects to projects. (#66)
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qubixes authored Jul 8, 2024
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Expand Up @@ -5,6 +5,23 @@ Here you find an overview of our [current](#current-projects) and [completed pro

### Current projects

| Workflows for Earth Sciences |
| --- |
| **Time frame**: 05/2024 - present |
| **Research domain**: Faculty of Geosciences |
| **Technologies**: Workflow frameworks, SnakeMake, Nextflow, CWL |
| **Research Engineers**: [Matty Vermet](https://www.uu.nl/staff/MSVermet), [Maarten Schermer](https://www.uu.nl/medewerkers/MDSchermer), [Christine Staiger](https://www.uu.nl/staff/CStaiger), [Raoul Schram](https://www.uu.nl/staff/RDSchram) |
| The research project concerns the reconstruction of the geological history of the earth. The researchers have many small software components, some of which are created by the research team itself, others inherited from other groups. We are helping them make this process more automated and less error prone by implementing their workflows using a workflow framework. |

| Workflows for Genetic analysis in Veterinary Sciences |
| --- |
| **Time frame**: 05/2024 - present |
| **Research domain**: Faculty of Veterinary Sciences |
| **Technologies**: Workflow frameworks, Galaxy |
| **Research Engineers**: [Matty Vermet](https://www.uu.nl/staff/MSVermet), [Maarten Schermer](https://www.uu.nl/medewerkers/MDSchermer), [Christine Staiger](https://www.uu.nl/staff/CStaiger), [Raoul Schram](https://www.uu.nl/staff/RDSchram), [Jelle Treep](https://www.uu.nl/staff/HJTreep), [Dawa Ometto](https://www.uu.nl/medewerkers/DLAOmetto) |
| The researchers are conducting research on the influence of genetics on dog diseases. This uses many different pieces of software and generates huge amounts of data. Many of the researchers are not programmers, which is why we are implementing the Galaxy workflow framework. This framework will enable researchers to use a graphical user interface to set the parameters of their analysis and run it. |


| Mental-health-recovery |
| --- |
| **Time frame**: 07/2024 - present |
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