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It performs a search on PubMed looking for the <a
href="https://pubmed.ncbi.nlm.nih.gov/?term=agent-based+model&amp;sort=date"
target="_blank">latest papers about Agent-Based Models</a>. The last
update was on 2024-06-02 00:40:52.
update was on 2024-06-09 00:42:38.

<div class="cell">

</div>

1. **Evaluating targeted COVID-19 vaccination strategies with
agent-based modeling.**
1. **Analysis of rural broadband adoption dynamics: A theory-driven
agent-based model.**

Hladish TJ, Pillai AN, Pearson CAB, Toh KB, Tamayo AC, Stoltzfus A,
Longini IM.
Agarwal A, Canfield C.

PLoS Comput Biol. 2024 May 31;20(5):e1012128. doi:
10.1371/journal.pcbi.1012128. Online ahead of print.
PLoS One. 2024 Jun 6;19(6):e0302146. doi:
10.1371/journal.pone.0302146. eCollection 2024.

> We evaluate approaches to vaccine distribution using an
> agent-based model of human activity and COVID-19 transmission
> calibrated to detailed trends in cases, hospitalizations, deaths,
> seroprevalence, and vaccine breakthrough infections in Florida,
> USA. …
> However, there is typically insufficient data available to
> understand consumer attitudes. We propose using an agent-based
> model grounded in the Theory of Planned Behavior, a behavioral
> theory that explains the consumer’s decision-making process. The
> model …
2. **Graphical analysis of agent-based opinion formation models.**
2. **Elucidating the interaction between stretch and stiffness using an
agent-based spring network model of progressive pulmonary
fibrosis.**

Devia CA, Giordano G.
Hall JK, Bates JHT, Krishnan R, Kim JH, Deng Y, Lutchen KR, Suki B.

PLoS One. 2024 May 30;19(5):e0303204. doi:
10.1371/journal.pone.0303204. eCollection 2024.
Front Netw Physiol. 2024 May 22;4:1396383. doi:
10.3389/fnetp.2024.1396383. eCollection 2024.

> Agent-based models of opinion formation are becoming increasingly
> complex, because of their size and of the embedding of several
> individual psychological traits of the agents, aimed at
> realistically capturing the multifaceted aspects of social
> interaction. .. …
> Pulmonary fibrosis is a deadly disease that involves the
> dysregulation of fibroblasts and myofibroblasts, which are
> mechanosensitive. Previous computational models have succeeded in
> modeling stiffness-mediated fibroblasts behaviors; however, these
> models have …
3. **Habitat remediation followed by managed connectivity reduces
unwanted changes in evolutionary trajectory of high extirpation risk
populations.**
3. **How can agent-based modelling provide new insights into the impact
of minimum unit pricing in Scotland?**

Lamka GF, Willoughby JR.
Boyd J, Holmes J, Gibbs N, Buckley C, Purshouse R, Meier P.

PLoS One. 2024 May 30;19(5):e0304276. doi:
10.1371/journal.pone.0304276. eCollection 2024.
Drug Alcohol Rev. 2024 Jun 5. doi: 10.1111/dar.13880. Online ahead
of print.

> Unfortunately, monitoring changes in genetic diversity from
> management actions such as assisted migration and predicting the
> extent of introduced genetic variation that is needed to prevent
> extirpation is difficult and costly in situ. Therefore, we
> designed an agent-bas …
> ., balance between on-licence and off-licence outlets), lead to
> long-term population-level trends (e.g., youth drinking) and
> social harms (e.g., violence). Agent-based modelling captures
> heterogeneity, emergence, feedback loops and adaptive and dynamic
> featur …
4. **Incorporating endogenous human behavior in models of COVID-19
transmission: A systematic scoping review.**
4. **Game-theoretic agent-based modelling of micro-level conflict:
Evidence from the ISIS-Kurdish war.**

Hamilton A, Haghpanah F, Tulchinsky A, Kipshidze N, Poleon S, Lin G,
Du H, Gardner L, Klein E.
Macmillan-Scott O, Ünver A, Musolesi M.

Dialogues Health. 2024 May 7;4:100179. doi:
10.1016/j.dialog.2024.100179. eCollection 2024 Jun.
PLoS One. 2024 Jun 5;19(6):e0297483. doi:
10.1371/journal.pone.0297483. eCollection 2024.

> Fewer models incorporated behavior endogenously (e.g., dynamically
> changing a model parameter throughout the simulation). …Similarly,
> 15% used a network model, 11% used an agent-based model, 7% used a
> system dynamics model, and 1 …
> This article delves into the dynamics of a dyadic political
> violence case study in Rojava, Northern Syria, focusing on the
> conflict between Kurdish rebels and ISIS from January 1, 2017, to
> December 31, 2019. We employ agent-based modelling and a
> formalisation …
5. **In silico study of heterogeneous tumour-derived organoid response
to CAR T-cell therapy.**
5. **COVID-19 outbreaks in residential aged care facilities: an
agent-based modeling study.**

Luque LM, Carlevaro CM, Rodriguez-Lomba E, Lomba E.
McAndrew F, Sacks-Davis R, Abeysuriya RG, Delport D, West D, Parta
I, Majumdar S, Hellard M, Scott N.

Sci Rep. 2024 May 29;14(1):12307. doi: 10.1038/s41598-024-63125-5.
Front Public Health. 2024 May 21;12:1344916. doi:
10.3389/fpubh.2024.1344916. eCollection 2024.

> While understanding antigen heterogeneity is important for
> effective therapeutics, a good therapy strategy could enhance the
> therapy efficiency. In this work we introduce an agent-based model
> (ABM), built upon a previous ABM, to rationalise the outcomes of
> di …
> INTRODUCTION: A disproportionate number of COVID-19 deaths occur
> in Residential Aged Care Facilities (RACFs), where better evidence
> is needed to target COVID-19 interventions to prevent mortality.
> This study used an agent-based model to assess the role of com …
6. **Optimizing Solid Tumor Treatment with Antibody-drug Conjugates
Using Agent-Based Modeling: Considering the Role of a Carrier Dose
and Payload Class.**
6. **Pleiotropy alleviates the fitness costs associated with resource
allocation trade-offs in immune signalling networks.**

Calopiz MC, Linderman JJ, Thurber GM.
Martin RA, Tate AT.

Pharm Res. 2024 May 28. doi: 10.1007/s11095-024-03715-0. Online
ahead of print.
Proc Biol Sci. 2024 Jun;291(2024):20240446. doi:
10.1098/rspb.2024.0446. Epub 2024 Jun 5.

> OBJECTIVE: In this work, we study two carrier dose regimens: 1)
> matching payload potency to cellular delivery but potentially not
> reaching cells farther away from blood vessels, or 2) dosing to
> tumor saturation but risking a reduction in cell killing from a
> lower amount of payloa …
> To investigate factors that could influence the evolutionary
> maintenance of pleiotropy in gene networks, we developed an
> agent-based model of co-evolution between parasites and hosts.
> Hosts comprise signalling networks that must faithfully complete a
> developm …
7. **An agent-based model of the spread of behavioural risk-factors for
cardiovascular disease in city-scale populations.**
7. **Agent-based model demonstrates the impact of nonlinear, complex
interactions between cytokinces on muscle regeneration.**

Archbold J, Clohessy S, Herath D, Griffiths N, Oyebode O.
Haase M, Comlekoglu T, Petrucciani A, Peirce SM, Blemker SS.

PLoS One. 2024 May 28;19(5):e0303051. doi:
10.1371/journal.pone.0303051. eCollection 2024.
Elife. 2024 Jun 3;13:RP91924. doi: 10.7554/eLife.91924.

> Exploiting these social influences may lead to effective and
> efficient public health interventions to prevent CVD. This project
> aimed to construct and validate an agent-based model (ABM) of how
> the four major behavioural risk-factors for CVD spread through so
> …
> To understand the degree to which individual cellular behaviors
> impact endogenous mechanisms of muscle recovery, we developed an
> agent-based model (ABM) using the Cellular-Potts framework to
> simulate the dynamic microenvironment of a cross-section of murine
> s …
8. **Advancing autologous CAR T-cell therapy through real-time patient
health data integration: a simulation-based approach.**
8. **Surrogate Modeling and Control of Medical Digital Twins.**

Tseng CY, Wang K, Lin LH, Zhang C, White CC 3rd, Wang B.
Fonseca LL, Böttcher L, Mehrad B, Laubenbacher RC.

Cytotherapy. 2024 May 6:S1465-3249(24)00707-2. doi:
10.1016/j.jcyt.2024.05.001. Online ahead of print.
ArXiv \[Preprint\]. 2024 May 20:arXiv:2402.05750v2.

> SimPAC integrates system dynamics and agent-based simulation
> techniques, facilitating the adaptation of manufacturing processes
> and production schedules based on real-time patient health
> conditions. SimPAC can model various patient disease progressions
> using …
> This paper introduces surrogate modeling algorithms for the
> purpose of optimal control applications. As a use case, we focus
> on agent-based models (ABMs), a common model type in biomedicine
> for which there are no readily available optimal contro …
9. **Feedback between stochastic gene networks and population dynamics
enables cellular decision-making.**
9. **Spatial interactions modulate tumor growth and immune
infiltration.**

Piho P, Thomas P.
West J, Marzban S, Srivast S, Kartika S, Bravo R, Safriel R, Zarski
A, Anderson A, Chung C, Amelio A.

Sci Adv. 2024 May 24;10(21):eadl4895. doi: 10.1126/sciadv.adl4895.
Epub 2024 May 24.
Res Sq \[Preprint\]. 2024 May 22:rs.3.rs-3962451. doi:
10.21203/rs.3.rs-3962451/v1.

> Such noise arises from fluctuations in reactions synthesizing
> proteins and plays a crucial role in how cells make decisions and
> respond to stress or drugs. We propose a general stochastic
> agent-based model for growing populations capturing the feedback
> betwee …
> Historically, agent-based models of cancer progression have been
> constructed with rules that govern birth, death and migration,
> with attempts to map local rules to emergent global growth
> dynamics. …Lenia is subsequently used to develop data-informed
> mode …
10. **The Efficacy and Safety of Tandem Transplant Versus Single Stem
Cell Transplant for Multiple Myeloma Patients: A Systematic Review
and Meta-Analysis.**
10. **Liquid-like condensates that bind actin drive filament
polymerization and bundling.**

Chen YH, Fogel L, Sun AY, Yang C, Patel R, Chang WC, Chen PH, Jhou
HJ, Chen YC, Dai MS, Lee CH.
Walker C, Chandrasekaran A, Mansour D, Graham K, Torres A, Wang L,
Lafer EM, Rangamani P, Stachowiak JC.

Diagnostics (Basel). 2024 May 16;14(10):1030. doi:
10.3390/diagnostics14101030.
bioRxiv \[Preprint\]. 2024 May 22:2024.05.04.592527. doi:
10.1101/2024.05.04.592527.

> The primary outcomes were progression-free survival (PFS), overall
> survival (OS), overall response rate (ORR), complete response rate
> (CRR), and treatment-related mortality (TRM). We used a
> random-effects model to calculate pooled hazard ratios (HRs) and
> relative risks (RR …
> To probe the minimum requirements for condensate-mediated actin
> bundling, we developed an agent-based computational model. Guided
> by its predictions, we hypothesized that any condensate-forming
> protein that binds actin could bundle filaments through multivale
> …
## Code of Conduct

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