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Update 20240702#347

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Merged

erinyoung merged 17 commits intomasterUPHL-BioNGS/Cecret:masterfrom update-20240702UPHL-BioNGS/Cecret:update-20240702Copy head branch name to clipboardJul 9, 2024

+860-621

Commits

Commits on Jul 3, 2024

• adding mpx_yale

  erinyoung

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  13beabc

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• fix vadr results

  erinyoung

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  c72ea09

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• fixed workflow version

  erinyoung

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  181c9e5

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• adjusted version

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  199cf7c

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• adjusted version

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  a2d1349

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• adding result files to summary

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  committed
  4452fbf

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• adjusted version

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  c9e130a

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• reformated

  erinyoung

  committed
  9c57fcc

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• update to version 3.8.0

  erinyoung

  committed
  5ac67c1

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• added link

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  7ff07e0

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• check for kraken2 files

  erinyoung

  committed
  113ba02

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• added vadr

  erinyoung

  committed
  839fd5f

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• added ignore to errorStrategy

  erinyoung

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  55e7562

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Commits on Jul 9, 2024

• Update freyja to 1.5.1-07_02_2024-01-27-2024-07-09

  erinyoung

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  f51b59b

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• add docker rmi

  erinyoung

  authored
  4a9dce6

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• Update pangolin to 4.3.1-pdata-1.28.1

  erinyoung

  authored
  54a1db6

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• Update nextflow.config to 3.15.24191

  erinyoung

  authored
  5be5d8c

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