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pkgsrc installation on El Capitan #303

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tlcarpenter opened this issue Nov 16, 2015 · 5 comments
Closed

pkgsrc installation on El Capitan #303

tlcarpenter opened this issue Nov 16, 2015 · 5 comments
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@tlcarpenter
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Is installation of pkgrc bootstrap 2015Q3 x86_64 supported on El Capitan? I'm new to using pkgsrc and tried to cook-book my way through the 64-bit Mavericks steps

http://pkgsrc.joyent.com/install-on-osx/

on my El Capitan 10.11.1 system but get the following error

"./var/db/pkgin/cache/: Cannot extract through symlink var"

Haven't looked into this but wonder if this error may be a result of El Capitan's "System Integrity Protection / rootless".

  • Tom
@jperkin jperkin self-assigned this Nov 16, 2015
@jperkin
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jperkin commented Nov 16, 2015

Yeh, this is something other El Capitan users have noticed - let me construct a bootstrap kit using the full path, I'll have one available for testing shortly.

@tlcarpenter
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Thank you.

  • Tom

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jperkin commented Nov 16, 2015

@tlcarpenter
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Downloaded/installed the modified 'bootstrap' package and was able to install and run the Claws Mail binary. Thanks again.

jperkin referenced this issue in TritonDataCenter/pkgsrc.smartos.org Nov 16, 2015
@jperkin
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jperkin commented Nov 16, 2015

Thanks! I've updated the live bootstraps for both 32-bit and 64-bit.

@jperkin jperkin closed this as completed Nov 16, 2015
jperkin referenced this issue in TritonDataCenter/pkgbuild Dec 9, 2015
  - Support Linux.
  - Sync Darwin configuration with trunk.
  - Add /etc/paths.d/10-pkgsrc on Darwin.
  - Work around TritonDataCenter/pkgsrc#303.
  - Make 'set -e' clean, and ensure we report failure correctly.
  - Use some variables to keep it under 80 columns.
jperkin pushed a commit that referenced this issue Dec 30, 2015
Ok MAINTAINER bsiegert.

While doing that, update to current release, 0.29.0.
Changes since 0.24.0:

Version 0.29.0
--------------

Compatibility notes:

- when upgrading to 0.29.0 you need to upgrade client as well as server
  installations due to the locking and commandline interface changes otherwise
  you'll get an error msg about a RPC protocol mismatch or a wrong commandline
  option.
  if you run a server that needs to support both old and new clients, it is
  suggested that you have a "borg-0.28.2" and a "borg-0.29.0" command.
  clients then can choose via e.g. "borg --remote-path=borg-0.29.0 ...".
- the default waiting time for a lock changed from infinity to 1 second for a
  better interactive user experience. if the repo you want to access is
  currently locked, borg will now terminate after 1s with an error message.
  if you have scripts that shall wait for the lock for a longer time, use
  --lock-wait N (with N being the maximum wait time in seconds).

Bug fixes:

- hash table tuning (better chosen hashtable load factor 0.75 and prime initial
  size of 1031 gave ~1000x speedup in some scenarios)
- avoid creation of an orphan lock for one case, #285
- --keep-tag-files: fix file mode and multiple tag files in one directory, #432
- fixes for "borg upgrade" (attic repo converter), #466
- remove --progress isatty magic (and also --no-progress option) again, #476
- borg init: display proper repo URL
- fix format of umask in help pages, #463

New features:

- implement --lock-wait, support timeout for UpgradableLock, #210
- implement borg break-lock command, #157
- include system info below traceback, #324
- sane remote logging, remote stderr, #461:

  - remote log output: intercept it and log it via local logging system,
    with "Remote: " prefixed to message. log remote tracebacks.
  - remote stderr: output it to local stderr with "Remote: " prefixed.
- add --debug and --info (same as --verbose) to set the log level of the
  builtin logging configuration (which otherwise defaults to warning), #426
  note: there are few messages emitted at DEBUG level currently.
- optionally configure logging via env var BORG_LOGGING_CONF
- add --filter option for status characters: e.g. to show only the added
  or modified files (and also errors), use "borg create -v --filter=AME ...".
- more progress indicators, #394
- use ISO-8601 date and time format, #375
- "borg check --prefix" to restrict archive checking to that name prefix, #206

Other changes:

- hashindex_add C implementation (speed up cache re-sync for new archives)
- increase FUSE read_size to 1024 (speed up metadata operations)
- check/delete/prune --save-space: free unused segments quickly, #239
- increase rpc protocol version to 2 (see also Compatibility notes), #458
- silence borg by default (via default log level WARNING)
- get rid of C compiler warnings, #391
- upgrade OS X FUSE to 3.0.9 on the OS X binary build system
- use python 3.5.1 to build binaries
- docs:

  - new mailing list [email protected], #468
  - readthedocs: color and logo improvements
  - load coverage icons over SSL (avoids mixed content)
  - more precise binary installation steps
  - update release procedure docs about OS X FUSE
  - FAQ entry about unexpected 'A' status for unchanged file(s), #403
  - add docs about 'E' file status
  - add "borg upgrade" docs, #464
  - add developer docs about output and logging
  - clarify encryption, add note about client-side encryption
  - add resources section, with videos, talks, presentations, #149
  - Borg moved to Arch Linux [community]
  - fix wrong installation instructions for archlinux


Version 0.28.2
--------------

New features:

- borg create --exclude-if-present TAGFILE - exclude directories that have the
  given file from the backup. You can additionally give --keep-tag-files to
  preserve just the directory roots and the tag-files (but not backup other
  directory contents), #395, attic #128, attic #142

Other changes:

- do not create docs sources at build time (just have them in the repo),
  completely remove have_cython() hack, do not use the "mock" library at build
  time, #384
- avoid hidden import, make it easier for PyInstaller, easier fix for #218
- docs:

  - add description of item flags / status output, fixes #402
  - explain how to regenerate usage and API files (build_api or
    build_usage) and when to commit usage files directly into git, #384
  - minor install docs improvements


Version 0.28.1
--------------

Bug fixes:

- do not try to build api / usage docs for production install,
  fixes unexpected "mock" build dependency, #384

Other changes:

- avoid using msgpack.packb at import time
- fix formatting issue in changes.rst
- fix build on readthedocs


Version 0.28.0
--------------

Compatibility notes:

- changed return codes (exit codes), see docs. in short:
  old: 0 = ok, 1 = error. now: 0 = ok, 1 = warning, 2 = error

New features:

- refactor return codes (exit codes), fixes #61
- add --show-rc option enable "terminating with X status, rc N" output, fixes 58, #351
- borg create backups atime and ctime additionally to mtime, fixes #317
  - extract: support atime additionally to mtime
  - FUSE: support ctime and atime additionally to mtime
- support borg --version
- emit a warning if we have a slow msgpack installed
- borg list --prefix=thishostname- REPO, fixes #205
- Debug commands (do not use except if you know what you do: debug-get-obj,
  debug-put-obj, debug-delete-obj, debug-dump-archive-items.

Bug fixes:

- setup.py: fix bug related to BORG_LZ4_PREFIX processing
- fix "check" for repos that have incomplete chunks, fixes #364
- borg mount: fix unlocking of repository at umount time, fixes #331
- fix reading files without touching their atime, #334
- non-ascii ACL fixes for Linux, FreeBSD and OS X, #277
- fix acl_use_local_uid_gid() and add a test for it, attic #359
- borg upgrade: do not upgrade repositories in place by default, #299
- fix cascading failure with the index conversion code, #269
- borg check: implement 'cmdline' archive metadata value decoding, #311
- fix RobustUnpacker, it missed some metadata keys (new atime and ctime keys
  were missing, but also bsdflags). add check for unknown metadata keys.
- create from stdin: also save atime, ctime (cosmetic)
- use default_notty=False for confirmations, fixes #345
- vagrant: fix msgpack installation on centos, fixes #342
- deal with unicode errors for symlinks in same way as for regular files and
  have a helpful warning message about how to fix wrong locale setup, fixes #382
- add ACL keys the RobustUnpacker must know about

Other changes:

- improve file size displays, more flexible size formatters
- explicitly commit to the units standard, #289
- archiver: add E status (means that an error occured when processing this
  (single) item
- do binary releases via "github releases", closes #214
- create: use -x and --one-file-system (was: --do-not-cross-mountpoints), #296
- a lot of changes related to using "logging" module and screen output, #233
- show progress display if on a tty, output more progress information, #303
- factor out status output so it is consistent, fix surrogates removal,
  maybe fixes #309
- move away from RawConfigParser to ConfigParser
- archive checker: better error logging, give chunk_id and sequence numbers
  (can be used together with borg debug-dump-archive-items).
- do not mention the deprecated passphrase mode
- emit a deprecation warning for --compression N (giving a just a number)
- misc .coverragerc fixes (and coverage measurement improvements), fixes #319
- refactor confirmation code, reduce code duplication, add tests
- prettier error messages, fixes #307, #57
- tests:

  - add a test to find disk-full issues, #327
  - travis: also run tests on Python 3.5
  - travis: use tox -r so it rebuilds the tox environments
  - test the generated pyinstaller-based binary by archiver unit tests, #215
  - vagrant: tests: announce whether fakeroot is used or not
  - vagrant: add vagrant user to fuse group for debianoid systems also
  - vagrant: llfuse install on darwin needs pkgconfig installed
  - vagrant: use pyinstaller from develop branch, fixes #336
  - benchmarks: test create, extract, list, delete, info, check, help, fixes #146
  - benchmarks: test with both the binary and the python code
  - archiver tests: test with both the binary and the python code, fixes #215
  - make basic test more robust
- docs:

  - moved docs to borgbackup.readthedocs.org, #155
  - a lot of fixes and improvements, use mobile-friendly RTD standard theme
  - use zlib,6 compression in some examples, fixes #275
  - add missing rename usage to docs, closes #279
  - include the help offered by borg help <topic> in the usage docs, fixes #293
  - include a list of major changes compared to attic into README, fixes #224
  - add OS X install instructions, #197
  - more details about the release process, #260
  - fix linux glibc requirement (binaries built on debian7 now)
  - build: move usage and API generation to setup.py
  - update docs about return codes, #61
  - remove api docs (too much breakage on rtd)
  - borgbackup install + basics presentation (asciinema)
  - describe the current style guide in documentation
  - add section about debug commands
  - warn about not running out of space
  - add example for rename
  - improve chunker params docs, fixes #362
  - minor development docs update


Version 0.27.0
--------------

New features:

- "borg upgrade" command - attic -> borg one time converter / migration, #21
- temporary hack to avoid using lots of disk space for chunks.archive.d, #235:
  To use it: rm -rf chunks.archive.d ; touch chunks.archive.d
- respect XDG_CACHE_HOME, attic #181
- add support for arbitrary SSH commands, attic #99
- borg delete --cache-only REPO (only delete cache, not REPO), attic #123


Bug fixes:

- use Debian 7 (wheezy) to build pyinstaller borgbackup binaries, fixes slow
  down observed when running the Centos6-built binary on Ubuntu, #222
- do not crash on empty lock.roster, fixes #232
- fix multiple issues with the cache config version check, #234
- fix segment entry header size check, attic #352
  plus other error handling improvements / code deduplication there.
- always give segment and offset in repo IntegrityErrors


Other changes:

- stop producing binary wheels, remove docs about it, #147
- docs:
  - add warning about prune
  - generate usage include files only as needed
  - development docs: add Vagrant section
  - update / improve / reformat FAQ
  - hint to single-file pyinstaller binaries from README


Version 0.26.1
--------------

This is a minor update, just docs and new pyinstaller binaries.

- docs update about python and binary requirements
- better docs for --read-special, fix #220
- re-built the binaries, fix #218 and #213 (glibc version issue)
- update web site about single-file pyinstaller binaries

Note: if you did a python-based installation, there is no need to upgrade.


Version 0.26.0
--------------

New features:

- Faster cache sync (do all in one pass, remove tar/compression stuff), #163
- BORG_REPO env var to specify the default repo, #168
- read special files as if they were regular files, #79
- implement borg create --dry-run, attic issue #267
- Normalize paths before pattern matching on OS X, #143
- support OpenBSD and NetBSD (except xattrs/ACLs)
- support / run tests on Python 3.5

Bug fixes:

- borg mount repo: use absolute path, attic #200, attic #137
- chunker: use off_t to get 64bit on 32bit platform, #178
- initialize chunker fd to -1, so it's not equal to STDIN_FILENO (0)
- fix reaction to "no" answer at delete repo prompt, #182
- setup.py: detect lz4.h header file location
- to support python < 3.2.4, add less buggy argparse lib from 3.2.6 (#194)
- fix for obtaining ``char *`` from temporary Python value (old code causes
  a compile error on Mint 17.2)
- llfuse 0.41 install troubles on some platforms, require < 0.41
  (UnicodeDecodeError exception due to non-ascii llfuse setup.py)
- cython code: add some int types to get rid of unspecific python add /
  subtract operations (avoid ``undefined symbol FPE_``... error on some platforms)
- fix verbose mode display of stdin backup
- extract: warn if a include pattern never matched, fixes #209,
  implement counters for Include/ExcludePatterns
- archive names with slashes are invalid, attic issue #180
- chunker: add a check whether the POSIX_FADV_DONTNEED constant is defined -
  fixes building on OpenBSD.

Other changes:

- detect inconsistency / corruption / hash collision, #170
- replace versioneer with setuptools_scm, #106
- docs:

  - pkg-config is needed for llfuse installation
  - be more clear about pruning, attic issue #132
- unit tests:

  - xattr: ignore security.selinux attribute showing up
  - ext3 seems to need a bit more space for a sparse file
  - do not test lzma level 9 compression (avoid MemoryError)
  - work around strange mtime granularity issue on netbsd, fixes #204
  - ignore st_rdev if file is not a block/char device, fixes #203
  - stay away from the setgid and sticky mode bits
- use Vagrant to do easy cross-platform testing (#196), currently:

  - Debian 7 "wheezy" 32bit, Debian 8 "jessie" 64bit
  - Ubuntu 12.04 32bit, Ubuntu 14.04 64bit
  - Centos 7 64bit
  - FreeBSD 10.2 64bit
  - OpenBSD 5.7 64bit
  - NetBSD 6.1.5 64bit
  - Darwin (OS X Yosemite)


Version 0.25.0
--------------

Compatibility notes:

- lz4 compression library (liblz4) is a new requirement (#156)
- the new compression code is very compatible: as long as you stay with zlib
  compression, older borg releases will still be able to read data from a
  repo/archive made with the new code (note: this is not the case for the
  default "none" compression, use "zlib,0" if you want a "no compression" mode
  that can be read by older borg). Also the new code is able to read repos and
  archives made with older borg versions (for all zlib levels  0..9).

Deprecations:

- --compression N (with N being a number, as in 0.24) is deprecated.
  We keep the --compression 0..9 for now to not break scripts, but it is
  deprecated and will be removed later, so better fix your scripts now:
  --compression 0 (as in 0.24) is the same as --compression zlib,0 (now).
  BUT: if you do not want compression, you rather want --compression none
  (which is the default).
  --compression 1 (in 0.24) is the same as --compression zlib,1 (now)
  --compression 9 (in 0.24) is the same as --compression zlib,9 (now)

New features:

- create --compression none (default, means: do not compress, just pass through
  data "as is". this is more efficient than zlib level 0 as used in borg 0.24)
- create --compression lz4 (super-fast, but not very high compression)
- create --compression zlib,N (slower, higher compression, default for N is 6)
- create --compression lzma,N (slowest, highest compression, default N is 6)
- honor the nodump flag (UF_NODUMP) and do not backup such items
- list --short just outputs a simple list of the files/directories in an archive

Bug fixes:

- fixed --chunker-params parameter order confusion / malfunction, fixes #154
- close fds of segments we delete (during compaction)
- close files which fell out the lrucache
- fadvise DONTNEED now is only called for the byte range actually read, not for
  the whole file, fixes #158.
- fix issue with negative "all archives" size, fixes #165
- restore_xattrs: ignore if setxattr fails with EACCES, fixes #162

Other changes:

- remove fakeroot requirement for tests, tests run faster without fakeroot
  (test setup does not fail any more without fakeroot, so you can run with or
  without fakeroot), fixes #151 and #91.
- more tests for archiver
- recover_segment(): don't assume we have an fd for segment
- lrucache refactoring / cleanup, add dispose function, py.test tests
- generalize hashindex code for any key length (less hardcoding)
- lock roster: catch file not found in remove() method and ignore it
- travis CI: use requirements file
- improved docs:

  - replace hack for llfuse with proper solution (install libfuse-dev)
  - update docs about compression
  - update development docs about fakeroot
  - internals: add some words about lock files / locking system
  - support: mention BountySource and for what it can be used
  - theme: use a lighter green
  - add pypi, wheel, dist package based install docs
  - split install docs into system-specific preparations and generic instructions
jperkin pushed a commit that referenced this issue Mar 18, 2016
## 1.2.0 (March 15, 2016)
* Integrate work from the EventMachine-LE 1.1.x versions [#570]
* Add start_tls options :ecdh_curve, :dhparam, :fail_if_no_peer_cert [#195, #275, #399, #665]
* Add start_tls option :ssl_version for choosing SSL/TLS versions and ciphers [#359, #348, #603, #654]
* Add start_tls option :sni_hostname to be passed to TLS params [#593]
* Add method EM::Channel#num_subscribers to get the number of subscribers to a channel [#640]
* Add support for proc-sources in EM::Iterator [#639]
* Factor out method cleanup_machine to cleanup code from EM.run [#650]
* Replace Exception class with StandardError [#637]
* Close socket on close_connection even after close_connection_after_writing [#694]
* Allow reusing of datagram socket/setting bind device [#662]
* Handle deferred exceptions in reactor thread [#486]
* Reimplement Queue to avoid shift/push performance problem [#311]
* Windows: Switch from gethostbyname to getaddrinfo, support IPv6 addresses [#303, #630]
* Windows: Use rake-compiler-dock to cross-compile gems [#627]
* Windows: Add AppVeyor configuration for Windows CI testing [#578]
* Windows: Bump rake-compiler to version 0.9.x [#542]
* Fix compilation on AIX (w/ XLC) [#693]
* Fix build on OpenBSD [#690]
* Fix OpenSSL compile issue on AIX 7.1 [#678]
* Fix EventMachine.fork_reactor keeps the threadpool of the original process [#425]
* Fix to prevent event machine from stopping when a raise is done in an unbind [#327]
jperkin pushed a commit that referenced this issue Jul 17, 2016
- Fix incorrectly reporting files containing disabled formatting as
  being formatted.
- Fix incorrect handling of quoted arguments in the options file (#321).
- Fix error in identifying an enum return type as an enumeration
  (#322, 323).
- Fix error in identifying an enum argument as an enumeration (#327).
- Fix recognition of Qt keywords when used as variables in C++ (#329).
- Fix recognition of a pointer in a C++ cast (#316).
- Fix removing trailing whitespace after a changed pointer or
  reference cast.

- Add new bracket style option "style=vtk" (#155).
- Add new option "indent-preproc-block" to indent blocks of preprocessor
  directives (#21, #114, #229, #242, #294).
- Add new option, "dry-run", to run AStyle without updating the files
  (#184, #285).
- Add new options, "html" (-!") and "html=###", to display the HTML help
  documentation in the default browser.
- Add tags "*INDENT-OFF*" and "*INDENT_ON*" to disable formatting of
  source code blocks (#2, #47, #55, #78, #110, #176).
- Add tag *NOPAD* to disable selected formatting on a single line.
- Add '__attribute__ ((visibility ("default")))' to Linux exported functions.
- Remove option "style=ansi" and make it depreciated (#146).
- Remove fix for broken 'case' statements from release 2.02.1, Nov 21, 2011.
- Improve Korean translation (#256).
- Change shared libraries to include the version number as part of the
  file name (#264)
- Change "help" display to stdout to allow piping and redirection (#63).
- Change "version" display to stdout.
- Change headers to include foreach, forever, Q_FOREACH, and Q_FOREVER
  (#98, #154).
- Change compiler definition ASTYLE_NO_VCX (no Visual Studio exports) to
  ASTYLE_NO_EXPORTS.
- Change shared library error handler argument from "char*" to "const char*".
- Fix not recognizing noexcept, interrupt, and autoreleasepool as
  pre-command headers (#225, #259).
- Fix formatting of C++11 uniform initializer brackets (#253, #257,
  #260, #284).
- Fix to not automatically space pad C++11 uniform initializer
  brackets (#275).
- Fix formatting of enums with leading commas (#159, #179, #270).
- Fix formatting of logical && operator in class initializers (#290).
- Fix flagging a 'const' variable as a 'const' method (#275).
- Fix piping and redirection adding an extra character to the output
  (#245, #252, #305).
- Fix "indent-modifiers" to attach class access modifiers to Horstmann
  style brackets.
- Fix ASFormatter to correctly recognize the end of a C++ raw string
  literal (#261).
- Fix to recognize C++11 "enum class" as an enum (#303).
- Fix indent of C++11 "noexecpt" statements within a class (#260, #304).
- Fix not resetting templateDepth when a template was not found (#295).
- Fix formatting of multiplication in a block paren (#144).
- Fix whitespace padding when formatting an rvalue references (#297).
- Fix to recognize an rvalue reference without a name (#265).
- Fix to not identify an operator overload method as a calculation (#296).
- Fix concatenating multiplication with a pointer dereference (#291).
- Fix recognition of a pointer dereference following a question mark (#213).
- Fix extra space after a trailing reference type (#300).
- Fix _asm blocks not being identified as a block opener and the
  variable not cleared on exit (#163).
- Fix indentation of line comments before a "class" opening bracket.
- Fix indentation of line comments before a "namespace" opening bracket.
- Fix isBracketType() method to correctly process a NULL_TYPE.
- Fix unpad-paren to recognize additional variables (#43, #132, #143).
- Fix indentation of C# "let" statements.
- Fix a few omissions with "fill-empty-lines".
- Fix file read to read 64K blocks of data.
- Refactor to un-obfuscate (clarify) the code, and improve design and
  decomposition::
    - Extract class Utf8_16 from ASConsole.
    - Replace Linux dependency on iconv with a Utf8_16 class for ASLibrary.
    - Move global "using" statements to the astyle namespace in astyle.h
      and ASLocalizer.h.
    - Move shared library declarations from astyle.h to astyle_main.h.
    - Move indentable macros from ASEnhancer to ASResource and create
      static pairs.
    - Simplify ASBeautifier procedure to identify the colon (:) type.
    - Major refactoring in ASBeautifier to create separate variables for
      an enum, a class statement and a class initializer.
    - This was needed to fix the processing of C++11 uniform
      initializers in a class initializer.
    - Minor changes to ASFormatter and ASBeautifier based on results of
      the Clang analyzer.
    - Change several methods in astyle_main to "const".
jperkin pushed a commit that referenced this issue Mar 20, 2017
v1.2.1

* Add accessor to @internal_file_attributes #304
* Extended globbing #303
* README updates #283, #289
* Cleanup after tests #298, #306
* Fix permissions on new zip files #294, #300
* Fix examples #297
* Support cp932 encoding #308
* Fix Directory traversal vulnerability #315
* Allow open_buffer to work without a given block #314
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