Fix filenames for download

TimVanMourik · Jan 11, 2018 · c79b6e0 · c79b6e0
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Showing 19 changed files with 17 additions and 17 deletions.
diff --git a/docs/_examples/1_simple_example.md b/docs/_examples/1_simple_example.md
@@ -46,5 +46,5 @@ associated Dockerfile in our [Github repository](https://github.com/TimVanMourik
 [<i class="fa fa-download"></i> Download Dockerfile][3]{: .btn}
 
 [1]:{{ site.url }}{{ site.baseurl }}/{{ example_path }}/porcupine_pipeline.pork
-[2]:{{ site.url }}{{ site.baseurl }}/{{ example_path }}/porcupine_generated_workflow.py
+[2]:{{ site.url }}{{ site.baseurl }}/{{ example_path }}/porcupine_generated_pipeline.py
 [3]:{{ site.url }}{{ site.baseurl }}/{{ example_path }}/Dockerfile
diff --git a/docs/_examples/2_iterables_example.md b/docs/_examples/2_iterables_example.md
@@ -45,5 +45,5 @@ associated Dockerfile in our [Github repository](https://github.com/TimVanMourik
 [<i class="fa fa-download"></i> Download Dockerfile][3]{: .btn}
 
 [1]:{{ site.url }}{{ site.baseurl }}/{{ example_path }}/porcupine_pipeline.pork
-[2]:{{ site.url }}{{ site.baseurl }}/{{ example_path }}/porcupine_generated_workflow.py
+[2]:{{ site.url }}{{ site.baseurl }}/{{ example_path }}/porcupine_generated_pipeline.py
 [3]:{{ site.url }}{{ site.baseurl }}/{{ example_path }}/Dockerfile
diff --git a/docs/_examples/3_mapnode_example.md b/docs/_examples/3_mapnode_example.md
@@ -58,5 +58,5 @@ associated Dockerfile in our [Github repository](https://github.com/TimVanMourik
 [<i class="fa fa-download"></i> Download Dockerfile][3]{: .btn}
 
 [1]:{{ site.url }}{{ site.baseurl }}/{{ example_path }}/porcupine_pipeline.pork
-[2]:{{ site.url }}{{ site.baseurl }}/{{ example_path }}/porcupine_generated_workflow.py
+[2]:{{ site.url }}{{ site.baseurl }}/{{ example_path }}/porcupine_generated_pipeline.py
 [3]:{{ site.url }}{{ site.baseurl }}/{{ example_path }}/Dockerfile
diff --git a/docs/_examples/5_rsfmri_example.md b/docs/_examples/5_rsfmri_example.md
@@ -34,5 +34,5 @@ associated Dockerfile in our [Github repository](https://github.com/TimVanMourik
 [<i class="fa fa-download"></i> Download Dockerfile][3]{: .btn}
 
 [1]:{{ site.url }}{{ site.baseurl }}/{{ example_path }}/porcupine_pipeline.pork
-[2]:{{ site.url }}{{ site.baseurl }}/{{ example_path }}/porcupine_generated_workflow.py
+[2]:{{ site.url }}{{ site.baseurl }}/{{ example_path }}/porcupine_generated_pipeline.py
 [3]:{{ site.url }}{{ site.baseurl }}/{{ example_path }}/Dockerfile
diff --git a/docs/_examples/6_firstlevel_example.md b/docs/_examples/6_firstlevel_example.md
@@ -38,5 +38,5 @@ associated Dockerfile in our [Github repository](https://github.com/TimVanMourik
 [<i class="fa fa-download"></i> Download Dockerfile][3]{: .btn}
 
 [1]:{{ site.url }}{{ site.baseurl }}/{{ example_path }}/porcupine_pipeline.pork
-[2]:{{ site.url }}{{ site.baseurl }}/{{ example_path }}/porcupine_generated_workflow.py
+[2]:{{ site.url }}{{ site.baseurl }}/{{ example_path }}/porcupine_generated_pipeline.py
 [3]:{{ site.url }}{{ site.baseurl }}/{{ example_path }}/Dockerfile
diff --git a/docs/_examples/7_FEAT_example.md b/docs/_examples/7_FEAT_example.md
@@ -30,5 +30,5 @@ associated Dockerfile in our [Github repository](https://github.com/TimVanMourik
 [<i class="fa fa-download"></i> Download Dockerfile][3]{: .btn}
 
 [1]:{{ site.url }}{{ site.baseurl }}/{{ example_path }}/porcupine_pipeline.pork
-[2]:{{ site.url }}{{ site.baseurl }}/{{ example_path }}/porcupine_generated_workflow.py
+[2]:{{ site.url }}{{ site.baseurl }}/{{ example_path }}/porcupine_generated_pipeline.py
 [3]:{{ site.url }}{{ site.baseurl }}/{{ example_path }}/Dockerfile
diff --git a/docs/_examples/example_pipelines/FEAT_fsl_complete_firstlevel_and_secondlevel/Dockerfile b/docs/_examples/example_pipelines/FEAT_fsl_complete_firstlevel_and_secondlevel/Dockerfile
@@ -69,6 +69,6 @@ ENV FSLDIR=/opt/fsl \
 #--------------------------------
 # Add custom analysis file as CMD
 #--------------------------------
-ADD ./porcupine_generated_workflow.py /run.py
+ADD ./porcupine_generated_pipeline.py /run.py
 ADD ./firstlevelhelpers.py /firstlevelhelpers.py
-CMD ["python", "/run.py"]
+CMD ["python", "/run.py"]
diff --git a/...condlevel/porcupine_generated_workflow.py → ...condlevel/porcupine_generated_pipeline.py b/...condlevel/porcupine_generated_workflow.py → ...condlevel/porcupine_generated_pipeline.py
diff --git a/docs/_examples/example_pipelines/firstlevel_fsl_and_custom_modules_example/Dockerfile b/docs/_examples/example_pipelines/firstlevel_fsl_and_custom_modules_example/Dockerfile
@@ -69,6 +69,6 @@ ENV FSLDIR=/opt/fsl \
 #--------------------------------
 # Add custom analysis file as CMD
 #--------------------------------
-ADD ./porcupine_generated_workflow.py /run.py
+ADD ./porcupine_generated_pipeline.py /run.py
 ADD ./firstlevelhelpers.py /firstlevelhelpers.py
-CMD ["python", "/run.py"]
+CMD ["python", "/run.py"]
diff --git a/...s_example/porcupine_generated_workflow.py → ...s_example/porcupine_generated_pipeline.py b/...s_example/porcupine_generated_workflow.py → ...s_example/porcupine_generated_pipeline.py
diff --git a/docs/_examples/example_pipelines/iterable_example/Dockerfile b/docs/_examples/example_pipelines/iterable_example/Dockerfile
@@ -69,5 +69,5 @@ ENV FSLDIR=/opt/fsl \
 #--------------------------------
 # Add custom analysis file as CMD
 #--------------------------------
-ADD ./porcupine_generated_workflow.py /run.py
+ADD ./porcupine_generated_pipeline.py /run.py
 CMD ["python", "/run.py"]
diff --git a/...e_example/porcupine_generated_workflow.py → ...e_example/porcupine_generated_pipeline.py b/...e_example/porcupine_generated_workflow.py → ...e_example/porcupine_generated_pipeline.py
diff --git a/docs/_examples/example_pipelines/multirun_mapnode_example/Dockerfile b/docs/_examples/example_pipelines/multirun_mapnode_example/Dockerfile
@@ -87,5 +87,5 @@ RUN apt-get update -qq && apt-get install -yq --no-install-recommends ed gsl-bin
 #--------------------------------
 # Add custom analysis file as CMD
 #--------------------------------
-ADD ./porcupine_generated_workflow.py /run.py
-CMD ["python", "/run.py"]
+ADD ./porcupine_generated_pipeline.py /run.py
+CMD ["python", "/run.py"]
diff --git a/...e_example/porcupine_generated_workflow.py → ...e_example/porcupine_generated_pipeline.py b/...e_example/porcupine_generated_workflow.py → ...e_example/porcupine_generated_pipeline.py
diff --git a/docs/_examples/example_pipelines/resting_preproc_fsl_example/Dockerfile b/docs/_examples/example_pipelines/resting_preproc_fsl_example/Dockerfile
@@ -69,5 +69,5 @@ ENV FSLDIR=/opt/fsl \
 #--------------------------------
 # Add custom analysis file as CMD
 #--------------------------------
-ADD ./porcupine_generated_workflow.py /run.py
-CMD ["python", "/run.py"]
+ADD ./porcupine_generated_pipeline.py /run.py
+CMD ["python", "/run.py"]
diff --git a/...l_example/porcupine_generated_workflow.py → ...l_example/porcupine_generated_pipeline.py b/...l_example/porcupine_generated_workflow.py → ...l_example/porcupine_generated_pipeline.py
diff --git a/docs/_examples/example_pipelines/simple_example/Dockerfile b/docs/_examples/example_pipelines/simple_example/Dockerfile
@@ -67,5 +67,5 @@ ENV FSLDIR=/opt/fsl \
 #--------------------------------
 # Add custom analysis file as CMD
 #--------------------------------
-ADD porcupine_generated_workflow.py /run.py
+ADD porcupine_generated_pipeline.py /run.py
 CMD ["python", "/run.py"]
diff --git a/...e_example/porcupine_generated_workflow.py → ...e_example/porcupine_generated_pipeline.py b/...e_example/porcupine_generated_workflow.py → ...e_example/porcupine_generated_pipeline.py
diff --git a/docs/_examples/example_pipelines/skullstrip_afni_ants_example/Dockerfile b/docs/_examples/example_pipelines/skullstrip_afni_ants_example/Dockerfile
@@ -113,5 +113,5 @@ ENV FSLDIR=/opt/fsl \
 #--------------------------------
 # Add custom analysis file as CMD
 #--------------------------------
-ADD ./porcupine_generated_workflow.py /run.py
+ADD ./porcupine_generated_pipeline.py /run.py
 CMD ["python", "/run.py"]