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Merge changes from main #6

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Apr 10, 2020
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b5134ad
fixing bulletin board link (#391)
duvivier Jan 1, 2020
5d6b26c
Macros fixes and diag_type fix (#396)
apcraig Jan 17, 2020
e18b650
fsd2 (#394)
lettie-roach Jan 24, 2020
a2b9fab
Add conda environment to run on personal computers (#393)
phil-blain Jan 24, 2020
0011980
cleaning up minor documentation (#397)
duvivier Jan 30, 2020
1287fbc
Add CONTRIBUTING, update README (#392)
phil-blain Feb 2, 2020
321b0d2
cleaning up README
eclare108213 Feb 2, 2020
1513a66
implementing suggestions from PR #392
eclare108213 Feb 2, 2020
d1008ce
fixing spacing
eclare108213 Feb 2, 2020
9cc6b23
link to documentation section of resources index
eclare108213 Feb 2, 2020
ab56cbe
fix license link
eclare108213 Feb 2, 2020
77635aa
machines: conda: fix linux env to be in line with the doc (#400)
phil-blain Feb 5, 2020
5264e42
update izumi intel compiler after upgrade (#401)
apcraig Feb 7, 2020
0bd9cdc
doc: conda: add note about csh/tcsh (#402)
phil-blain Feb 7, 2020
1561e76
update suite.submit script and add new controls and cice.setup option…
apcraig Feb 14, 2020
2e1c3b7
Fix errors in cice.setup script and add travis tests to catch this so…
apcraig Feb 18, 2020
7e11a34
update copyright year, update internal version number in preparation …
apcraig Feb 21, 2020
f3aec72
Add additional basal stress parameters to the dynamics namelist (#404)
daveh150 Feb 26, 2020
e81f710
Added JRA55 forcing for gx3 grid; modified ice-forcing.F90 to now han…
rallard77 Feb 28, 2020
abc7b5a
Iceopen (#410)
daveh150 Feb 28, 2020
7e2a1d9
fix albedo initialization order of operations and update icepack (#414)
apcraig Mar 6, 2020
7b43a6f
update cori port and update icepack (#416)
apcraig Mar 10, 2020
771aecb
update wave_spec_frac filename implementation and update icepack (#417)
apcraig Mar 13, 2020
6cc0d6b
remove guest Bouchat from template
eclare108213 Mar 18, 2020
5f97e45
add Osinski to template
eclare108213 Mar 18, 2020
9040fe2
conda: Macros: add '-L' argument to the linker command (#418)
phil-blain Mar 26, 2020
9ac1863
Update travis data download to zenodo, update conda macos Macros file…
apcraig Mar 30, 2020
1bf6e8d
Isotopes for CICE (#423)
eclare108213 Apr 8, 2020
85ba54d
HYCOM notation: ewndsp,nwndsp --> wndewd,wndnwd (#425)
mhrib Apr 10, 2020
d529df8
Jedi DA modifications (#427)
apcraig Apr 10, 2020
a7c2893
Secure, that best guess for max_blocks is always >= 1 (#431)
mhrib Apr 10, 2020
1c6c225
update test reporting (#428)
apcraig Apr 10, 2020
31a1975
update cori batch setup (#432)
apcraig Apr 10, 2020
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12 changes: 8 additions & 4 deletions .travis.yml
Original file line number Diff line number Diff line change
Expand Up @@ -20,18 +20,22 @@ addons:

install:
# Fetch CICE grid files and initial conditions
- "wget ftp://ftp.cgd.ucar.edu/archive/Model-Data/CICE/CICE_data_ic_grid.tar.gz &&
tar xvfz CICE_data_ic_grid.tar.gz -C ~"
- "wget https://zenodo.org/record/3728358/files/CICE_data_gx3_grid_ic-20200320.tar.gz &&
tar xvfz CICE_data_gx3_grid_ic-20200320.tar.gz -C ~"

# Fetch forcing data
- "wget ftp://ftp.cgd.ucar.edu/archive/Model-Data/CICE/CICE_data_forcing_gx3_all.tar.gz &&
tar xvfz CICE_data_forcing_gx3_all.tar.gz -C ~"
- "wget https://zenodo.org/record/3728362/files/CICE_data_gx3_forcing_NCAR_bulk-20200320.tar.gz &&
tar xvfz CICE_data_gx3_forcing_NCAR_bulk-20200320.tar.gz -C ~"

# Mirror entire data folder
#- "lftp ftp://anonymous:[email protected]@ftp.cgd.ucar.edu
#-e 'mirror /archive/Model-Data/CICE/ ~/ICEPACK_INPUTDATA; quit'"

script:
# verify cice.setup --case and cice.setup --test don't error then run test suite
- "./cice.setup --case trcase --mach travisCI --env gnu --pes 2x2 -s diag1"
- "./cice.setup --test smoke --testid trtest --mach travisCI --env gnu
--pes 2x2 -s diag1"
- "./cice.setup --suite travis_suite --testid travisCItest
--mach travisCI --env gnu;
cd testsuite.travisCItest &&
Expand Down
10 changes: 5 additions & 5 deletions .zenodo.json
Original file line number Diff line number Diff line change
Expand Up @@ -31,10 +31,6 @@
"affiliation": "Environment and Climate Change Canada",
"name": "Philippe Blain"
},
{
"affiliation": "Environment and Climate Change Canada",
"name": "Amelie Bouchat"
},
{
"affiliation": "National Oceanographic and Atmospheric Administration (CTR)",
"name": "Anthony Craig"
Expand Down Expand Up @@ -67,6 +63,10 @@
"affiliation": "Environment and Climate Change Canada",
"name": "Jean-Francois Lemieux"
},
{
"affiliation": "Institute of Oceanology, Polish Academy of Sciences",
"name": "Robert Osinski"
},
{
"affiliation": "Danish Meteorological Institute",
"name": "Till Rasmussen"
Expand Down Expand Up @@ -99,4 +99,4 @@
"relation": "isNewVersionOf"
}
]
}
}
16 changes: 16 additions & 0 deletions CONTRIBUTING.md
Original file line number Diff line number Diff line change
@@ -0,0 +1,16 @@
# Contributing to CICE

Welcome to the CICE Consortium ! Thank you for your interest in contributing to CICE.

There are many ways to contribute, and we appreciate your efforts. For an introductory tour, head over to our [Contribution guide][contributing] and take a look at the [Resources page][resources], our go-to index with links to code, documentation, testing information, guidelines, and more.

[contributing]: https://github.com/CICE-Consortium/About-Us/wiki/Contributing
[resources]: https://github.com/CICE-Consortium/About-Us/wiki/Resource-Index

## Getting help
If you still need help getting started using the model after reviewing the [model documentation][doc-resources], the first point of contact with the CICE Consortium is the [Consortium Community Forum][forum]. This forum is monitored by Consortium members and is also open to the whole community. **Please do not use our issue tracker for general support questions.**

[doc-resources]: https://github.com/CICE-Consortium/About-Us/wiki/Resource-Index#model-documentation
[doc-running]: https://cice-consortium-cice.readthedocs.io/en/master/user_guide/ug_running.html
[forum]: https://xenforo.cgd.ucar.edu/cesm/forums/cice-consortium.146/

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32 changes: 26 additions & 6 deletions README.md
Original file line number Diff line number Diff line change
@@ -1,13 +1,30 @@
[![Build Status](https://travis-ci.org/CICE-Consortium/CICE.svg?branch=master)](https://travis-ci.org/CICE-Consortium/CICE)
[![Documentation Status](https://readthedocs.org/projects/cice-consortium-cice/badge/?version=master)](http://cice-consortium-cice.readthedocs.io/en/master/?badge=master)

## Overview
This repository contains the files and code needed to run the CICE sea ice numerical model starting with version 6. CICE is maintained by the CICE Consortium. Versions prior to v6 are found in the [CICE-svn-trunk repository](https://github.com/CICE-Consortium/CICE-svn-trunk).
## The CICE Consortium sea-ice model
CICE is a computationally efficient model for simulating the growth, melting, and movement of polar sea ice. Designed as one component of coupled atmosphere-ocean-land-ice global climate models, today’s CICE model is the outcome of more than two decades of community collaboration in building a sea ice model suitable for multiple uses including process studies, operational forecasting, and climate simulation.

CICE consists of a top level driver and dynamical core plus the Icepack column physics code, which is included in CICE as a git submodule. Because Icepack is a submodule of CICE, Icepack and CICE development are handled independently with respect to the github repositories even though development and testing may be done together.

If you expect to make any changes to the code, we recommend that you first fork both the CICE and Icepack repositories. Basic instructions for working with CICE and Icepack are found in the Git Workflow Guidance, linked from the Resource Index (below). In order to incorporate your developments into the Consortium code it is
imperative you follow the guidance for Pull Requests and requisite testing.
This repository contains the files and code needed to run the CICE sea ice numerical model starting with version 6. CICE is maintained by the CICE Consortium.
Versions prior to v6 are found in the [CICE-svn-trunk repository](https://github.com/CICE-Consortium/CICE-svn-trunk).

CICE consists of a top level driver and dynamical core plus the [Icepack column physics code][icepack], which is included in CICE as a Git submodule. Because Icepack is a submodule of CICE, Icepack and CICE development are handled independently with respect to the GitHub repositories even though development and testing may be done together.

[icepack]: https://github.com/CICE-Consortium/Icepack

If you need help getting started using the model afer reviewing the [model documentation][doc-resources], the first point of contact with the CICE Consortium is the [Consortium Community Forum][forum].
This forum is monitored by Consortium members and also opened to the whole community.
Please do not use our issue tracker for general support questions.

[doc-resources]: https://github.com/CICE-Consortium/About-Us/wiki/Resource-Index#model-documentation
[doc-running]: https://cice-consortium-cice.readthedocs.io/en/master/user_guide/ug_running.html
[forum]: https://xenforo.cgd.ucar.edu/cesm/forums/cice-consortium.146/

If you expect to make any changes to the code, we recommend that you first fork both the CICE and Icepack repositories.
In order to incorporate your developments into the Consortium code it is imperative you follow the guidance for Pull Requests and requisite testing.
Head over to our [Contribution guide][contributing] to learn more about how you can help improve CICE.

[contributing]: https://github.com/CICE-Consortium/About-Us/wiki/Contributing

## Useful links
* **CICE wiki**: https://github.com/CICE-Consortium/CICE/wiki
Expand All @@ -18,10 +35,13 @@ imperative you follow the guidance for Pull Requests and requisite testing.

Numbered CICE releases since version 6 with associated documentation and DOIs.

* **Consortium Community Bulletin Board**: https://bb.cgd.ucar.edu/forums/cice-consortium-model-development
* **Consortium Community Forum**: https://xenforo.cgd.ucar.edu/cesm/forums/cice-consortium.146/

First point of contact for discussing model development including bugs, diagnostics, and future directions.

* **Resource Index**: https://github.com/CICE-Consortium/About-Us/wiki/Resource-Index

List of resources for information about the Consortium and its repositories as well as model documentation, testing, and development.

## License
See our [License](License.pdf) and [Distribution Policy](DistributionPolicy.pdf).
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