Fix test #7245
Workflow file for this run
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name: TileDB Python CI | |
on: [push, pull_request, workflow_dispatch] | |
concurrency: | |
group: ${{ github.head_ref || github.run_id }} | |
cancel-in-progress: true | |
env: | |
S3_BUCKET: ${{ vars.S3_BUCKET }} | |
TILEDB_NAMESPACE: ${{ vars.TILEDB_NAMESPACE }} | |
TILEDB_TOKEN: ${{ secrets.TILEDB_TOKEN }} | |
jobs: | |
build: | |
runs-on: ${{ matrix.os }} | |
defaults: | |
run: | |
shell: bash | |
strategy: | |
matrix: | |
os: | |
- ubuntu-latest | |
- macos-13 | |
# libfaketime tests fail on macos arm. Disable tests for now. | |
# - macos-14 | |
- windows-latest | |
python-version: [ "3.9", "3.10", "3.11", "3.12"] | |
fail-fast: false | |
env: | |
MACOSX_DEPLOYMENT_TARGET: "11" | |
steps: | |
- name: Checkout TileDB-Py `dev` | |
uses: actions/checkout@v4 | |
- name: Setup MSVC toolset (VS 2022) | |
uses: TheMrMilchmann/setup-msvc-dev@v3 | |
if: startsWith(matrix.os, 'windows') | |
with: | |
arch: x64 | |
- name: Install Ninja (VS 2022) | |
uses: seanmiddleditch/gha-setup-ninja@v4 | |
if: startsWith(matrix.os, 'windows') | |
- name: Set up Python ${{ matrix.python-version }} | |
uses: actions/setup-python@v4 | |
with: | |
python-version: ${{ matrix.python-version }} | |
- name: Print Python version | |
run: | | |
which python | |
which pip | |
python --version | |
- name: Print env | |
run: printenv | |
- name: Print pip debug info | |
run: pip debug --verbose | |
# Remove after upstream PR fully-deployed: | |
# - https://github.com/actions/runner-images/pull/7125 | |
- name: "Install homebrew dependencies" | |
run: brew install pkg-config | |
if: startsWith(matrix.os, 'macos') | |
- name: "Install libfaketime (linux and macOS)" | |
if: ${{ ! startsWith(matrix.os, 'windows') }} | |
run: | | |
git clone https://github.com/wolfcw/libfaketime/ | |
cd libfaketime | |
sudo make install | |
cd .. | |
- name: "Build and Install TileDB-Py" | |
# We use pipx here to produce wheel/sdist to upload as artifact in case of error | |
run: | | |
pipx run --python ${{ matrix.python-version }} build | |
WHEEL_NAME=$(ls dist/*.whl) | |
pip install --verbose ${WHEEL_NAME}[test] | |
- name: "Run tests" | |
run: | | |
PROJECT_CWD=$PWD | |
rm tiledb/__init__.py | |
cd /tmp | |
pytest -vv --showlocals $PROJECT_CWD | |
- name: "Re-run tests without pandas" | |
run: | | |
pip uninstall -y pandas | |
pytest -vv --showlocals $PROJECT_CWD | |
- name: "Print log files (failed build only)" | |
run: | | |
set -xeo pipefail | |
# Display log files if the build failed | |
echo 'Dumping log files for failed build' | |
echo '----------------------------------' | |
for f in $(find build -name *.log); | |
do echo '------' | |
echo $f | |
echo '======' | |
cat $f | |
done; | |
if: failure() | |
- name: "Upload files for debug" | |
if: always() | |
uses: actions/upload-artifact@v4 | |
with: | |
name: cibw-wheels-${{ matrix.os }}-${{ matrix.python-version }} | |
path: "." |