gene2probe_env.yml

name: gene2probe
channels:
  - bioconda
  - defaults
dependencies:
  - _libgcc_mutex=0.1=main
  - _openmp_mutex=5.1=1_gnu
  - blast=2.5.0=hc0b0e79_3
  - boost=1.82.0=py311h06a4308_2
  - bzip2=1.0.8=h5eee18b_5
  - ca-certificates=2024.3.11=h06a4308_0
  - icu=73.1=h6a678d5_0
  - ld_impl_linux-64=2.38=h1181459_1
  - libboost=1.82.0=h109eef0_2
  - libffi=3.4.4=h6a678d5_0
  - libgcc-ng=11.2.0=h1234567_1
  - libgomp=11.2.0=h1234567_1
  - libstdcxx-ng=11.2.0=h1234567_1
  - libuuid=1.41.5=h5eee18b_0
  - lz4-c=1.9.4=h6a678d5_0
  - ncurses=6.4=h6a678d5_0
  - openssl=3.0.13=h7f8727e_0
  - pip=23.3.1=py311h06a4308_0
  - py-boost=1.82.0=py311h4cb112f_2
  - python=3.11.9=h955ad1f_0
  - readline=8.2=h5eee18b_0
  - setuptools=68.2.2=py311h06a4308_0
  - sqlite=3.41.2=h5eee18b_0
  - tk=8.6.12=h1ccaba5_0
  - wheel=0.41.2=py311h06a4308_0
  - xz=5.4.6=h5eee18b_0
  - zlib=1.2.13=h5eee18b_0
  - zstd=1.5.5=hc292b87_0
  - pip:
      - asttokens==2.4.1
      - biopython==1.83
      - comm==0.2.2
      - debugpy==1.8.1
      - decorator==5.1.1
      - executing==2.0.1
      - ipykernel==6.29.4
      - ipython==8.23.0
      - jedi==0.19.1
      - jupyter-client==8.6.1
      - jupyter-core==5.7.2
      - matplotlib-inline==0.1.7
      - nest-asyncio==1.6.0
      - numpy==1.26.4
      - packaging==24.0
      - pandas==2.2.2
      - parso==0.8.4
      - pexpect==4.9.0
      - platformdirs==4.2.1
      - prompt-toolkit==3.0.43
      - psutil==5.9.8
      - ptyprocess==0.7.0
      - pure-eval==0.2.2
      - pybedtools==0.10.0
      - pygments==2.17.2
      - pysam==0.22.1
      - python-dateutil==2.9.0.post0
      - pytz==2024.1
      - pyzmq==26.0.2
      - six==1.16.0
      - stack-data==0.6.3
      - tornado==6.4
      - traitlets==5.14.3
      - typing-extensions==4.11.0
      - tzdata==2024.1
      - wcwidth==0.2.13
prefix: /nfs/team205/is10/miniconda/envs/gene2probe