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First off, I want to say thank you for the great tool and excellent documentation!
I have a question regarding the label transfer process. I trained CellTypist with a reference dataset, but when I try to annotate, the tool attempts to download the models.json file from this URL. Unfortunately, I am working on a compute node without an internet connection.
Is there a way to bypass this download requirement?
Thanks in advance for your help!
Muhammet
The text was updated successfully, but these errors were encountered:
@macelik, please install the latest celltypist (v1.6.3), and usemodel = models.Model.load(model = './model_from_lasry.pkl'), which should allow you to load models offline.
Hello there,
First off, I want to say thank you for the great tool and excellent documentation!
I have a question regarding the label transfer process. I trained CellTypist with a reference dataset, but when I try to annotate, the tool attempts to download the models.json file from this URL. Unfortunately, I am working on a compute node without an internet connection.
Is there a way to bypass this download requirement?
Thanks in advance for your help!
Muhammet
The text was updated successfully, but these errors were encountered: