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feat: use cytoscape for graph and cleanup (#3535)
![Screenshot 2024-11-26 at 12 03 58 PM](https://github.com/user-attachments/assets/12484fed-6872-4496-948d-985262b97226) ![Screenshot 2024-11-26 at 12 04 02 PM](https://github.com/user-attachments/assets/cd5a3db4-1529-4f75-baef-1ad29e373b0e)
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