fix-data: carbohydrate formulas

as complex carbohydrates have varying length, it's best to use the monomeric form
SysBioChalmers · Dec 6, 2018 · 5c4f58d · 5c4f58d
1 parent 9451f05
commit 5c4f58d
Showing 1 changed file with 4 additions and 4 deletions.
diff --git a/ComplementaryData/modelCuration/Missingmetaboliteformulas.tsv b/ComplementaryData/modelCuration/Missingmetaboliteformulas.tsv
@@ -1,10 +1,10 @@
 Met ID	Met Name	Met Formula	Source	
 s_0709[m]	ferricytochrome c [mitochondrion]	C42H44FeN8O8S2R4	https://www.genome.jp/dbget-bin/www_bget?cpd:C00125
 s_0710[m]	ferrocytochrome c [mitochondrion]	C42H44FeN8O8S2R4	https://www.genome.jp/dbget-bin/www_bget?cpd:C00126
-s_0773[c]	glycogen [cytoplasm]	C24H42O21	https://www.genome.jp/dbget-bin/www_bget?C00182
-s_0774[v]	glycogen [vacuole]	C24H42O21	https://www.genome.jp/dbget-bin/www_bget?C00182
-s_1107[c]	mannan [cytoplasm]	C12H21O10(C12H20O11)n	https://www.genome.jp/dbget-bin/www_bget?cpd:C04276	
-s_1108[er]	mannan [endoplasmic reticulum]	C12H21O10(C12H20O11)n	https://www.genome.jp/dbget-bin/www_bget?cpd:C04276	
+s_0773[c]	glycogen [cytoplasm]	C6H12O6	Monomeric form = glucose
+s_0774[v]	glycogen [vacuole]	C6H12O6	Monomeric form = glucose
+s_1107[c]	mannan [cytoplasm]	C6H12O6	Monomeric form = mannose
+s_1108[er]	mannan [endoplasmic reticulum]	C6H12O6	Monomeric form = mannose
 s_2775[m]	3-hydroxybutanoyl-ACP [mitochondrion]	C4H7O2SR	https://www.genome.jp/dbget-bin/www_bget?C04618
 s_2778[m]	trans-but-2-enoyl-ACP [mitochondrion]	C4H5OS	https://www.ebi.ac.uk/chebi/searchId.do?chebiId=132146
 s_2779[m]	trans-hex-2-enoyl-ACP [mitochondrion]	C6H9OSR	https://www.genome.jp/dbget-bin/www_bget?C05748