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chore: new version
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haowang-bioinfo committed Mar 11, 2023
1 parent 2b5e13e commit 0d9ef84
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Showing 8 changed files with 130,882 additions and 130,157 deletions.
2 changes: 1 addition & 1 deletion code/masterScriptZebrafishGEM.m
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%% Prepare Zebrafish ortholog pairs and species-specific network

% get ortholog pairs from human to zebrafish
zebrafishOrthologPairs = extractAllianceGenomeOrthologs('human2ZebrafishOrthologs.json');
zebrafishOrthologPairs = extractAllianceGenomeOrthologs('human2ZebrafishOrthologs.tsv');

% load species-specific rxns and mets
rxnsToAdd = importTsvFile('zebrafishSpecificRxns.tsv');
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244,962 changes: 123,137 additions & 121,825 deletions model/Zebrafish-GEM.xml

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