Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

list of MAMids that can have new chebi xref #300

Closed
ANiknejad opened this issue Aug 18, 2021 · 2 comments
Closed

list of MAMids that can have new chebi xref #300

ANiknejad opened this issue Aug 18, 2021 · 2 comments

Comments

@ANiknejad
Copy link
Contributor

(issue in progress, I will report here the MAMids that can have a External database ref to chebi)

would be good to have CHEBI:77551 as xref for

https://metabolicatlas.org/explore/Human-GEM/gem-browser/metabolite/MAM00046m

please see
https://www.ebi.ac.uk/chebi/searchId.do?chebiId=CHEBI:77551

would be good to have CHEBI:34127 as xref for

https://metabolicatlas.org/explore/Human-GEM/gem-browser/metabolite/MAM00005c

please see:

https://www.ebi.ac.uk/chebi/searchId.do?chebiId=34127
@haowang-bioinfo
Copy link
Member

@ANiknejad good idea.

haowang-bioinfo added a commit that referenced this issue Oct 10, 2021
@haowang-bioinfo
fix: add new CHEBI ids as suggested in #300
fb981b0 
- associate MAM00005 with CHEBI:34127
- associate MAM00046 with CHEBI:77551
@haowang-bioinfo haowang-bioinfo mentioned this issue Oct 11, 2021
Merged
2 tasks
@mihai-sysbio
Copy link
Member

Again, as far as I can see PR #325 completely resolves this issue, which is why I am closing it.

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Assignees
No one assigned
Labels
None yet
Projects
None yet
Milestone
No milestone
Development

No branches or pull requests
3 participants
@ANiknejad @haowang-bioinfo @mihai-sysbio