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fix: remove MAR08564 and MAR08565
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- remove MAR08564+MAR08565 that are duplicate to MAR04222
- reverse reaction direction of MAR04222
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haowang-bioinfo committed Oct 14, 2023
1 parent dcc2690 commit 1eb71c6
Showing 1 changed file with 5 additions and 40 deletions.
45 changes: 5 additions & 40 deletions model/Human-GEM.yml
Original file line number Diff line number Diff line change
Expand Up @@ -81699,41 +81699,6 @@
- subsystem:
- "Tryptophan metabolism"
- confidence_score: 0
- !!omap
- id: "MAR08564"
- name: ""
- metabolites: !!omap
- MAM00926c: 1
- MAM01306c: -1
- MAM01974c: 1
- MAM02319c: -1
- lower_bound: 0
- upper_bound: 1000
- gene_reaction_rule: "ENSG00000109576 or ENSG00000137944 or ENSG00000171097"
- rxnNotes: ""
- rxnFrom: "HMRdatabase"
- eccodes: "2.6.1.7"
- references: ""
- subsystem:
- "Tryptophan metabolism"
- confidence_score: 0
- !!omap
- id: "MAR08565"
- name: ""
- metabolites: !!omap
- MAM00926c: -1
- MAM00990c: 1
- MAM02040c: 1
- lower_bound: 0
- upper_bound: 1000
- gene_reaction_rule: ""
- rxnNotes: ""
- rxnFrom: "HMRdatabase"
- eccodes: ""
- references: ""
- subsystem:
- "Tryptophan metabolism"
- confidence_score: 0
- !!omap
- id: "MAR08566"
- name: ""
Expand Down Expand Up @@ -82834,11 +82799,11 @@
- id: "MAR04222"
- name: ""
- metabolites: !!omap
- MAM00990c: -1
- MAM01306c: 1
- MAM01974c: -1
- MAM02040c: -1
- MAM02319c: 1
- MAM00990c: 1
- MAM01306c: -1
- MAM01974c: 1
- MAM02040c: 1
- MAM02319c: -1
- lower_bound: -1000
- upper_bound: 1000
- gene_reaction_rule: "ENSG00000109576 or ENSG00000137944 or ENSG00000171097"
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