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feat-rxn: add new reaction MAR13087
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- Add cis-aconitate decarboxylase reaction catalyzed by ACOD1 (IRG1), as proposed by Mouse-GEM issue #20
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haowang-bioinfo committed Nov 9, 2022
1 parent 4d94a2d commit 1892dde
Showing 1 changed file with 21 additions and 1 deletion.
22 changes: 21 additions & 1 deletion model/Human-GEM.yml
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short_name: "Human-GEM"
full_name: "Generic genome-scale metabolic model of Homo sapiens"
version: ""
date: "2022-07-27"
date: "2022-11-09"
authors: "Jonathan Robinson, Hao Wang, Pierre-Etienne Cholley, Pinar Kocabas"
email: "[email protected]"
organization: "Chalmers University of Technology"
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- subsystem:
- "Transport reactions"
- confidence_score: 2
- !!omap
- id: "MAR13087"
- name: ""
- metabolites: !!omap
- MAM01580m: -1
- MAM01596m: 1
- MAM02039m: -1
- MAM02191m: 1
- lower_bound: 0
- upper_bound: 1000
- gene_reaction_rule: "ENSG00000102794"
- rxnNotes: ""
- rxnFrom: ""
- eccodes: "4.1.1.6"
- references: "PMID:23610393;PMID:31548418"
- subsystem:
- "C5-branched dibasic acid metabolism"
- confidence_score: 4
- genes:
- !!omap
- id: "ENSG00000000419"
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- id: "ENSG00000288702"
- !!omap
- id: "ENSG00000288705"
- !!omap
- id: "ENSG00000102794"
- compartments: !!omap
- e: "Extracellular"
- x: "Peroxisome"
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