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Merge pull request #540 from SysBioChalmers/fix-LDH
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fix-bug: bug in GPR in #528
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haowang-bioinfo authored Apr 24, 2023
2 parents 981b6fc + 1a44fc6 commit 17f67c0
Showing 1 changed file with 6 additions and 6 deletions.
12 changes: 6 additions & 6 deletions model/Human-GEM.yml
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short_name: "Human-GEM"
full_name: "Generic genome-scale metabolic model of Homo sapiens"
version: ""
date: "2023-04-17"
date: "2023-04-24"
authors: "Jonathan Robinson, Hao Wang, Pierre-Etienne Cholley, Pinar Kocabas"
email: "[email protected]"
organization: "Chalmers University of Technology"
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- MAM02819x: -1
- lower_bound: -1000
- upper_bound: 1000
- gene_reaction_rule: "ENSG00000171989"
- gene_reaction_rule: "ENSG00000111716 or ENSG00000134333"
- rxnNotes: ""
- rxnFrom: "HMRdatabase"
- eccodes: "1.1.1.27"
- references: "PMID:12042361;PMID:17045662;PMID:7449128;PMID:9927705"
- references: "PMID:12042361;PMID:17045662;PMID:7449128;PMID:9927705;PMID:25247702"
- subsystem:
- "Glycolysis / Gluconeogenesis"
- confidence_score: 0
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- MAM03620c: 2
- lower_bound: 0
- upper_bound: 1000
- gene_reaction_rule: "(ENSG00000111716 and ENSG00000134333) or ENSG00000111716 or ENSG00000134333 or ENSG00000166796 or ENSG00000166800 or ENSG00000166816 or ENSG00000171989"
- gene_reaction_rule: "ENSG00000111716 or ENSG00000134333 or ENSG00000166796 or ENSG00000166800 or ENSG00000166816 or ENSG00000171989"
- rxnNotes: ""
- rxnFrom: "Recon3D"
- eccodes: "1.1.1.27"
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- MAM03176c: 1
- lower_bound: -1000
- upper_bound: 1000
- gene_reaction_rule: "(ENSG00000111716 and ENSG00000134333) or ENSG00000111716 or ENSG00000134333 or ENSG00000166796 or ENSG00000166800 or ENSG00000171989"
- gene_reaction_rule: "ENSG00000111716 or ENSG00000134333 or ENSG00000166796 or ENSG00000166800 or ENSG00000166816 or ENSG00000171989"
- rxnNotes: "https://www.springer.com/gp/book/9789400957800"
- rxnFrom: "Recon3D"
- eccodes: "1.1.1.27"
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- MAM03186c: 1
- lower_bound: -1000
- upper_bound: 1000
- gene_reaction_rule: "(ENSG00000111716 and ENSG00000134333) or ENSG00000111716 or ENSG00000134333 or ENSG00000166796 or ENSG00000166800 or ENSG00000171989"
- gene_reaction_rule: "ENSG00000111716 or ENSG00000134333 or ENSG00000166796 or ENSG00000166800 or ENSG00000166816 or ENSG00000171989"
- rxnNotes: "https://www.springer.com/gp/book/9789400957800"
- rxnFrom: "Recon3D"
- eccodes: "1.1.1.27"
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