Merge Duplicate Lipoic Acid Biosynthesis Pathways #1655
Workflow file for this run
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name: YAML validation | |
on: [push, pull_request] | |
jobs: | |
yaml-validation: | |
runs-on: ubuntu-latest | |
container: | |
image: ghcr.io/metabolicatlas/memote-docker:0.13 | |
volumes: | |
- ${{ github.workspace }}:/project:rw | |
options: --user root --workdir /project | |
steps: | |
- name: Checkout | |
uses: actions/checkout@v3 | |
- name: YAML Lint | |
uses: ibiqlik/[email protected] | |
with: | |
## File(s) or Directory, separate by space if multiple files or folder are specified | |
file_or_dir: model/ | |
## Custom configuration (as YAML source) | |
config_data: "{extends: default, rules: {line-length: disable}}" | |
## Return non-zero exit code on warnings as well as errors | |
# strict: # optional, default is false | |
- name: Basic MEMOTE tests | |
run: python code/test/memoteTest.py | |
- name: Test import with cobrapy and consistency with annotation files | |
run: python code/test/sanityCheck.py |