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Small tweaks to entrypoint.sh to allow for non-interactive running #1222

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Description

Please include:

  • relevant motivation
    • Trying to run the docker image automatically (perhaps on Amazon ECR) and it requires these steps
  • a summary of the change
    • Create the MODEL_DIR at the top of the script. This seems like an omission, I was not able to complete checkpoint download without this.
    • Pipe 'yes' to the conda clean command, so that interactive prompts are agreed to and no interaction is needed
  • which issue is fixed.
    • N/A
  • any additional dependencies that are required for this change.
    • N/A

Checklist:

  • [ x ] I have changed the base branch to dev
  • [ x ] I have performed a self-review of my own code
  • [ x ] I have commented my code in hard-to-understand areas
  • [ x ] I have made corresponding changes to the documentation

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