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SydneyBioX · Aug 9, 2024 · 4a415c4 · 4a415c4
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Showing 9 changed files with 36 additions and 10 deletions.
diff --git a/.quarto/_freeze/results/index/execute-results/html.json b/.quarto/_freeze/results/index/execute-results/html.json
diff --git a/.quarto/idx/results/index.qmd.json b/.quarto/idx/results/index.qmd.json
diff --git a/.quarto/preview/lock b/.quarto/preview/lock
@@ -1 +1 @@
-43932
+49056
diff --git a/docs/results/data/final_data2.csv b/docs/results/data/final_data2.csv
@@ -1,4 +1,4 @@
-id,adaptor,overall_summary,data_pro_summary,spatial_task_summary,scalability_summary,spfracZero,spLibSize,spEffLibSize,spTMM,spScaledVar,spScaledMean,splibsizeFracezero,spCorPearson,ftFracZero,ftScaledVar,ftScaledMean,ftPearson,ftScaleMeanVal,ftMeanFraczero,TM,NWE,CSM,celltype_interaction,L_stats,nn_correlation,morans_I,ARI,NMI,recall_svg,precision_svg,rmse_ctprob,jsd_ctprob,mantel_cor,cosine_cor,pred_time_cells200_features200,pred_time_cells3000_features500,pred_time_cells5000_features1000,pred_memory_cells200_features200,pred_memory_cells3000_features500,pred_memory_cells5000_features1000
+method,adaptor,overall_summary,data_pro_summary,spatial_task_summary,scalability_summary,spfracZero,spLibSize,spEffLibSize,spTMM,spScaledVar,spScaledMean,splibsizeFracezero,spCorPearson,ftFracZero,ftScaledVar,ftScaledMean,ftPearson,ftScaleMeanVal,ftMeanFraczero,TM,NWE,CSM,celltype_interaction,L_stats,nn_correlation,morans_I,ARI,NMI,recall_svg,precision_svg,rmse_ctprob,jsd_ctprob,mantel_cor,cosine_cor,pred_time_cells200_features200,pred_time_cells3000_features500,pred_time_cells5000_features1000,pred_memory_cells200_features200,pred_memory_cells3000_features500,pred_memory_cells5000_features1000
 SRTsim_rf,Yes,12.50,10.43,10.12,11.83,0.87,0.81,-3.53,-0.50,-22.09,-0.34,-0.77,0.10,-0.05,-8.13,0.06,-0.01,-10.74,-11.15,-0.26,-0.84,-0.31,0.08,1.29,-0.77,-2.25,0.58,0.60,0.78,0.81,-0.03,-0.08,-0.91,0.91,-1.00,-11.00,-32.00,-1941204.00,-2059443.00,-2128216.00
 SRTsim,No,12.17,10.48,10.12,9.67,3.32,-0.02,-1.58,-0.98,-42.51,-2.21,-4.54,-2.80,0.24,-21.80,0.14,0.15,-21.37,-0.51,-0.30,-0.76,-0.26,1.29,1.22,0.95,-0.19,0.58,0.58,0.80,0.84,-0.03,-0.09,-0.95,0.95,-4.00,-19.00,-50.00,-2212423.00,-2232741.00,-2503995.00
 SPARsim,Yes,9.50,8.71,6.88,9.08,-3.88,1.29,-3.96,-3.66,-26.28,0.37,-11.08,-21.39,-0.73,-40.62,-20.28,-2.26,-148.98,-0.48,-0.18,-0.52,-0.24,2.64,0.74,-14.06,-5.18,0.93,0.92,0.52,0.63,-0.09,-0.24,-0.68,0.68,-21.00,-43.00,-66.00,-1696115.00,-3635721.00,-4001645.00

diff --git a/docs/results/index.html b/docs/results/index.html
diff --git a/results/data/final_data2.csv b/results/data/final_data2.csv
@@ -1,4 +1,4 @@
-id,adaptor,overall_summary,data_pro_summary,spatial_task_summary,scalability_summary,spfracZero,spLibSize,spEffLibSize,spTMM,spScaledVar,spScaledMean,splibsizeFracezero,spCorPearson,ftFracZero,ftScaledVar,ftScaledMean,ftPearson,ftScaleMeanVal,ftMeanFraczero,TM,NWE,CSM,celltype_interaction,L_stats,nn_correlation,morans_I,ARI,NMI,recall_svg,precision_svg,rmse_ctprob,jsd_ctprob,mantel_cor,cosine_cor,pred_time_cells200_features200,pred_time_cells3000_features500,pred_time_cells5000_features1000,pred_memory_cells200_features200,pred_memory_cells3000_features500,pred_memory_cells5000_features1000
+method,adaptor,overall_summary,data_pro_summary,spatial_task_summary,scalability_summary,spfracZero,spLibSize,spEffLibSize,spTMM,spScaledVar,spScaledMean,splibsizeFracezero,spCorPearson,ftFracZero,ftScaledVar,ftScaledMean,ftPearson,ftScaleMeanVal,ftMeanFraczero,TM,NWE,CSM,celltype_interaction,L_stats,nn_correlation,morans_I,ARI,NMI,recall_svg,precision_svg,rmse_ctprob,jsd_ctprob,mantel_cor,cosine_cor,pred_time_cells200_features200,pred_time_cells3000_features500,pred_time_cells5000_features1000,pred_memory_cells200_features200,pred_memory_cells3000_features500,pred_memory_cells5000_features1000
 SRTsim_rf,Yes,12.50,10.43,10.12,11.83,0.87,0.81,-3.53,-0.50,-22.09,-0.34,-0.77,0.10,-0.05,-8.13,0.06,-0.01,-10.74,-11.15,-0.26,-0.84,-0.31,0.08,1.29,-0.77,-2.25,0.58,0.60,0.78,0.81,-0.03,-0.08,-0.91,0.91,-1.00,-11.00,-32.00,-1941204.00,-2059443.00,-2128216.00
 SRTsim,No,12.17,10.48,10.12,9.67,3.32,-0.02,-1.58,-0.98,-42.51,-2.21,-4.54,-2.80,0.24,-21.80,0.14,0.15,-21.37,-0.51,-0.30,-0.76,-0.26,1.29,1.22,0.95,-0.19,0.58,0.58,0.80,0.84,-0.03,-0.09,-0.95,0.95,-4.00,-19.00,-50.00,-2212423.00,-2232741.00,-2503995.00
 SPARsim,Yes,9.50,8.71,6.88,9.08,-3.88,1.29,-3.96,-3.66,-26.28,0.37,-11.08,-21.39,-0.73,-40.62,-20.28,-2.26,-148.98,-0.48,-0.18,-0.52,-0.24,2.64,0.74,-14.06,-5.18,0.93,0.92,0.52,0.63,-0.09,-0.24,-0.68,0.68,-21.00,-43.00,-66.00,-1696115.00,-3635721.00,-4001645.00

diff --git a/results/index.qmd b/results/index.qmd
@@ -113,7 +113,7 @@ filteredColumnInfo = removeLastNItems(column_info, 12);
 
 filteredColumnGroups = removeLastNItems(column_groups, 2);
 
-console.log(filteredColumnGroups)
+//console.log(filteredColumnGroups)
 
 
 ```

diff --git a/results/index_files/figure-html/unnamed-chunk-2-1.png b/results/index_files/figure-html/unnamed-chunk-2-1.png
diff --git a/results/index_files/figure-html/unnamed-chunk-3-1.png b/results/index_files/figure-html/unnamed-chunk-3-1.png
-Original file line number
+Diff line change
@@ Expand Up / @@ -113,7 +113,7 @@ filteredColumnInfo = removeLastNItems(column_info, 12); @@
     filteredColumnGroups = removeLastNItems(column_groups, 2);
-    console.log(filteredColumnGroups)
+    //console.log(filteredColumnGroups)
     ```
@@ Expand Down @@