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1.0 Full Release #231

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merged 664 commits into from
Mar 7, 2022
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e091e76
adding Sploosh model
briandrawert Oct 26, 2021
15b15c2
progress
briandrawert Oct 27, 2021
5c6f1fd
Fixed str function for the domain class.
BryanRumsey Nov 9, 2021
040f785
Refactered to use the fixed .
BryanRumsey Nov 9, 2021
f09f00c
Added the function to the Model class.
BryanRumsey Nov 9, 2021
324633e
Added 'auto' option for width and height.
BryanRumsey Nov 9, 2021
aea0371
Consolidated duplicate code in plotting functions.
BryanRumsey Nov 10, 2021
83abc32
Moved all core files into a core directory. Setup module init files …
BryanRumsey Nov 10, 2021
9464777
Fixed the core import.
BryanRumsey Nov 11, 2021
17bfc4d
Added spatialpy errors file to fix model error circular import.
BryanRumsey Nov 11, 2021
2c6a4bf
Fixed import issues.
BryanRumsey Nov 11, 2021
f664881
Pulled the Species, Parameter, and Reaction classes out of the model …
BryanRumsey Nov 11, 2021
9cb1625
Restructured the solver files.
BryanRumsey Nov 11, 2021
3326565
Added setter function for diffusion_coefficient.
BryanRumsey Nov 11, 2021
769dae9
Added unit tests for species class.
BryanRumsey Nov 11, 2021
884eb25
Fixed Species unit tests. Added Parameter unit tests.
BryanRumsey Nov 11, 2021
22f01bf
Added final tests for the parameter class.
BryanRumsey Nov 12, 2021
4355689
Fixed parameter tests.
BryanRumsey Nov 12, 2021
dd01e0a
More test fixes.
BryanRumsey Nov 12, 2021
831c73e
Added base constructor tests for the Reaction class.
BryanRumsey Nov 12, 2021
074acd4
Flushed out the test for Reaction.__init__. Added type checking to R…
BryanRumsey Nov 12, 2021
d4ae3c0
Added Parameter import for type checking.
BryanRumsey Nov 12, 2021
85a8dff
Moved the parameter import to the proper location.
BryanRumsey Nov 12, 2021
634e726
Fixed type checking for propensity function and rate.
BryanRumsey Nov 12, 2021
38df453
Fixed type checking for propensity function and rate take 2.
BryanRumsey Nov 12, 2021
bdd14c1
Added spatialpy.Parameter to the list of accepted types for a species…
BryanRumsey Nov 12, 2021
671a4f3
Merge pull request #164 from StochSS/natural-convection-example
seanebum Nov 29, 2021
7cd32f7
Merge pull request #199 from StochSS/model-domain-str
seanebum Nov 29, 2021
ffda632
Merge pull request #200 from StochSS/plotting-auto-width-height
seanebum Nov 29, 2021
0036155
Merge pull request #202 from StochSS/result-plot-cleanup
seanebum Nov 29, 2021
b1b0508
Merge branch 'develop' of https://github.com/StochSS/SpatialPy into r…
seanebum Nov 29, 2021
3d4ef8f
Merge pull request #203 from StochSS/repo-restucture
seanebum Nov 29, 2021
d64661e
Added unit tests for parameter diffusion coefficient for Species.
BryanRumsey Nov 30, 2021
29f9495
Added missing import.
BryanRumsey Nov 30, 2021
0976472
Fixed issue with value check.
BryanRumsey Nov 30, 2021
7a08331
Fixed unit test.
BryanRumsey Nov 30, 2021
0a305e0
Added test for Reaction.__str__ method.
BryanRumsey Nov 30, 2021
f6cef48
Added unit test for total stochiometry > 3.
BryanRumsey Nov 30, 2021
48a74be
Removed the eval block form the species block for species with parame…
BryanRumsey Nov 30, 2021
c9bc12e
Fixed the species unit tests to work with the updates. Fixed the uni…
BryanRumsey Nov 30, 2021
301a646
Fixed check for negative diffusion coefficient.
BryanRumsey Nov 30, 2021
04545d6
Move the name block to the Reaction class. Removed duplicate code fr…
BryanRumsey Dec 1, 2021
79a34b1
Added tests for Reaction.name. Added test for as string.
BryanRumsey Dec 1, 2021
2257a66
Added test for marate as parameter.
BryanRumsey Dec 1, 2021
3830177
Added missing import for reaction tests.
BryanRumsey Dec 1, 2021
75727a8
Fixed the Reaction._create_mass_action function.
BryanRumsey Dec 1, 2021
9f9632c
Fixed name references in error messages. Fixed marate tests.
BryanRumsey Dec 1, 2021
bde9296
Fixed name type check.
BryanRumsey Dec 1, 2021
0daf7a5
Added missing re import.
BryanRumsey Dec 1, 2021
99cb4ae
Restuctured the Model.py file.
BryanRumsey Dec 1, 2021
5f676d4
Added tests for Reaction._create_mass_action with marate as int and f…
BryanRumsey Dec 1, 2021
bf4d817
Fixed indentation issue.
BryanRumsey Dec 1, 2021
6545629
Added tests for propensity functions built using Reaction._create_mas…
BryanRumsey Dec 1, 2021
174f4d5
Restuctured the Reaction.py file. Fixed tests for propensity functio…
BryanRumsey Dec 1, 2021
650f4ba
Added additional type checking for Reaction.add_product and Reaction.…
BryanRumsey Dec 1, 2021
6f314e1
Added Species import.
BryanRumsey Dec 1, 2021
c053db3
Added type check for the annotation arg of Reaction.annotation.
BryanRumsey Dec 1, 2021
0d2e82f
Added tests for Reaction.annotation. Fixed issue with species constr…
BryanRumsey Dec 1, 2021
bd523f2
Fixed incorrect tests.
BryanRumsey Dec 1, 2021
8dcfc64
Fixed incorrect tests take two.
BryanRumsey Dec 1, 2021
a81e9ef
Fixed incorrect tests take three.
BryanRumsey Dec 1, 2021
7905267
Fixed incorrect tests take four.
BryanRumsey Dec 1, 2021
792d5ed
Fixed incorrect tests take five.
BryanRumsey Dec 1, 2021
79c7abb
Added checks for stioch species object in model.
BryanRumsey Dec 2, 2021
b2a1509
Added test for Reaction.initialize with propensity function.
BryanRumsey Dec 2, 2021
beacf0c
Added test for Reaction.initialize with rate only.
BryanRumsey Dec 7, 2021
86676c7
Added tests for Reaction.initialize for no propensity or rate set and…
BryanRumsey Dec 7, 2021
95ee58c
Added tests for checking if reactant and product species are not in t…
BryanRumsey Dec 7, 2021
b0d5a14
Added test to ensure species objects passed in as reactants are store…
BryanRumsey Dec 7, 2021
96ccc18
Added final reaction tests.
BryanRumsey Dec 7, 2021
b6fe71e
Updated examples to work with changes made for unit tests.
BryanRumsey Dec 8, 2021
16be907
status commit
briandrawert Dec 13, 2021
8e8384f
Merge pull request #205 from StochSS/unit-test
briandrawert Dec 13, 2021
9bd56fd
conflict resolution
briandrawert Dec 13, 2021
86c7cce
undo debugging
briandrawert Dec 13, 2021
17c72a8
added equation for setting P0 from c0
seanebum Jan 6, 2022
ae1ddb1
Fixing the Shepard filter
briandrawert Jan 12, 2022
8bac7a6
remove done TODOs
briandrawert Jan 12, 2022
430c5b3
cleanup
briandrawert Feb 2, 2022
f5b6281
Updated copyright to 'Copyright (C) 2019 - 2022'.
BryanRumsey Feb 2, 2022
5ce5f29
Added pylintrc file.
BryanRumsey Feb 2, 2022
b85cb65
pylint updates to __init__.
BryanRumsey Feb 2, 2022
31cc838
pylint changes to boundary conditions.
BryanRumsey Feb 2, 2022
a9d5910
Renamed file to match module naming convention.
BryanRumsey Feb 3, 2022
7746112
Pylint changes to the cleanup script.
BryanRumsey Feb 3, 2022
984ec9d
Updated docs for boundarycounditions and datafunctions. Pylint chang…
BryanRumsey Feb 3, 2022
39d4ea0
Updated docs. Pylint changes.
BryanRumsey Feb 3, 2022
735734f
Fixed import of non-dependant packages.
BryanRumsey Feb 3, 2022
a4766c4
Fixed imports in model file.
BryanRumsey Feb 3, 2022
ec8b1d0
Updated pylint rc file.
BryanRumsey Feb 3, 2022
982e76b
updated docs, mostly putting in returns
seanebum Feb 3, 2022
760a089
resolved merge conflicts
seanebum Feb 3, 2022
76cb1a5
Merge pull request #210 from StochSS/copyright-update
seanebum Feb 3, 2022
6d1838f
Pulled in changes from develop. Updated pylintrc file.
BryanRumsey Feb 3, 2022
3e3fe2c
Merge branch 'develop' of github.com:stochss/SpatialPy into fix/pressure
briandrawert Feb 3, 2022
911667f
Comnined property and species arguments.
BryanRumsey Feb 3, 2022
71fe6a6
Merge pull request #206 from StochSS/fix/pressure
BryanRumsey Feb 3, 2022
bfcb503
Pulled in changes from develop
BryanRumsey Feb 3, 2022
84f0ab5
Fixed issue with boundaryconition value type check.
BryanRumsey Feb 3, 2022
a0b7599
Added action items to domain.
BryanRumsey Feb 3, 2022
f294fc6
Fixed compatibility issues with action items.
BryanRumsey Feb 3, 2022
7f6827a
fixed import error
BryanRumsey Feb 3, 2022
8573fb9
fixed import error take 2.
BryanRumsey Feb 3, 2022
d4614e2
Pylint changes and updates to docs.
BryanRumsey Feb 4, 2022
1322643
Update docs and pylint changes for initialconditions.
BryanRumsey Feb 4, 2022
c93acf1
Fixed imports in __init__.
BryanRumsey Feb 4, 2022
cfc39ed
Pylint changes to species.py.
BryanRumsey Feb 4, 2022
f0563c7
Pylint changes and doc updates.
BryanRumsey Feb 4, 2022
2363b64
Fixed imports.
BryanRumsey Feb 4, 2022
75ff213
pylint changes to reaction.py.
BryanRumsey Feb 4, 2022
f92e8f3
Pylint changes and docs update.
BryanRumsey Feb 7, 2022
51d8cee
Fixed import issues.
BryanRumsey Feb 7, 2022
d62ce2f
Renamed results.py. Refactored and based on review comments.
BryanRumsey Feb 7, 2022
23d89bb
Renamed results.py. Refactored and based on review comments.
BryanRumsey Feb 7, 2022
7592653
Fixed import issues.
BryanRumsey Feb 7, 2022
4b98f5a
Docs update and pylint changes.
BryanRumsey Feb 7, 2022
97dc76c
Fixed matplotlib import error.
BryanRumsey Feb 7, 2022
8d775a4
Pylint changes and docs update for vtkreader.py
BryanRumsey Feb 8, 2022
3b715a8
Fixed issue with function name.
BryanRumsey Feb 8, 2022
2da6ea4
pylint changes and docs update fro spatialpyerrors.py
BryanRumsey Feb 8, 2022
8d64261
Fixed issue with function names.
BryanRumsey Feb 8, 2022
6f0b900
Pylint changes and docs update for expression.py.
BryanRumsey Feb 8, 2022
3cc194a
updated docstrings
seanebum Feb 8, 2022
be0ecf2
linted StochSSExport.py and changed module name to conform to snake c…
seanebum Feb 9, 2022
cee0600
Merge branch 'code-cleanup' of https://github.com/StochSS/SpatialPy i…
seanebum Feb 9, 2022
b9c467c
Pylint changes and docs update for solver.py.
BryanRumsey Feb 10, 2022
2bf1f20
Fixed import issues.
BryanRumsey Feb 10, 2022
4c6c1ec
Pylint changes.
BryanRumsey Feb 10, 2022
1dbceea
Fixed inits for core and solver.
BryanRumsey Feb 10, 2022
6ce3acb
Fixed circular import.
BryanRumsey Feb 10, 2022
9b9f816
Fixed circular import in model.py.
BryanRumsey Feb 10, 2022
2a2ba25
Fixed circular import in solver.py.
BryanRumsey Feb 10, 2022
f100721
Fixed issue with build_dir is None in solver.py.
BryanRumsey Feb 10, 2022
89f0a31
Cleaned up turing patter examples. Created new 'Under Construction' d…
BryanRumsey Feb 11, 2022
e4c57e9
Fixed incorrect arg name.
BryanRumsey Feb 11, 2022
e45d180
Updated the sploosh example and moved it to under construction.
BryanRumsey Feb 11, 2022
a3d84fd
Fixed fill_with_particles function to work for 3D domains.
BryanRumsey Feb 11, 2022
eb8e9cc
Renamed 'expression' to 'build_expression' and moved it to the solver…
BryanRumsey Feb 11, 2022
72aee4d
Merge branch 'code-cleanup' of https://github.com/StochSS/SpatialPy i…
BryanRumsey Feb 11, 2022
816ebeb
Updated the mincde example and moved it to under construction.
BryanRumsey Feb 11, 2022
fc0fc9c
Fixed private functions in results.py.
BryanRumsey Feb 11, 2022
50c714e
Merge branch 'code-cleanup' of https://github.com/StochSS/SpatialPy i…
BryanRumsey Feb 11, 2022
3627835
Updated the natural convection example and moved it to under construc…
BryanRumsey Feb 11, 2022
9306f9b
Updated the bistable example and moved it to under construction.
BryanRumsey Feb 11, 2022
05e7160
Updated the lid driven cavity example and moved it to under construct…
BryanRumsey Feb 11, 2022
9e2c888
Updated the cylinder demo. Removed the old example. Removed the pyu…
BryanRumsey Feb 11, 2022
66deca0
Updated the coral reef example.
BryanRumsey Feb 11, 2022
b256a8b
Updated the hes1 example.
BryanRumsey Feb 11, 2022
464848a
Updated the weir example.
BryanRumsey Feb 14, 2022
acfb544
Updated the Polarisome_1D example.
BryanRumsey Feb 14, 2022
97559fa
Updated the G-Protein_1D example.
BryanRumsey Feb 14, 2022
d9d2ffb
Merge branch 'code-cleanup' of https://github.com/StochSS/SpatialPy i…
seanebum Feb 14, 2022
187d696
Updated the cdc42 example.
BryanRumsey Feb 14, 2022
9846e09
Restructured the Under Construction folder in examples.
BryanRumsey Feb 14, 2022
002988f
Updates to paths in Under Construction examples.
BryanRumsey Feb 14, 2022
3365445
Fixed coords in Domain.fill_with_particles.
BryanRumsey Feb 15, 2022
6fec66e
Merge branch 'code-cleanup' of https://github.com/StochSS/SpatialPy i…
BryanRumsey Feb 15, 2022
7e5c6da
Restructured the 3d cylinder demo files.
BryanRumsey Feb 15, 2022
188e1c0
Restructures the coral reef example.
BryanRumsey Feb 15, 2022
59d675a
updating docstrings
seanebum Feb 15, 2022
3fdc3ee
Restructured the hes1 example.
BryanRumsey Feb 15, 2022
e9ec6fb
Restructured the weir example.
BryanRumsey Feb 15, 2022
ba098c0
Merge pull request #217 from StochSS/update-docs
BryanRumsey Feb 15, 2022
e13dff1
Merge branch 'code-cleanup' of https://github.com/StochSS/SpatialPy i…
BryanRumsey Feb 15, 2022
16b1963
Updated the boundary conditions examples.
BryanRumsey Feb 15, 2022
1ba83a8
Updated the spatialpy gravity example.
BryanRumsey Feb 15, 2022
ed8e689
initial build of docs 1.0
seanebum Feb 15, 2022
6ff83c1
Switched Domain.type to Domain.type_id.
BryanRumsey Feb 17, 2022
7b38af0
Added support for named types. updated type ploting to use type names…
BryanRumsey Feb 18, 2022
c33941b
Added call to update the type name mapping to the compile prep functi…
BryanRumsey Feb 18, 2022
8caadab
Merge branch 'code-cleanup' of https://github.com/StochSS/SpatialPy i…
BryanRumsey Feb 18, 2022
b634d10
Fixed matplotlip ploting.
BryanRumsey Feb 18, 2022
cfe4a72
Merge branch 'code-cleanup' of https://github.com/StochSS/SpatialPy i…
BryanRumsey Feb 18, 2022
ee88c22
Updated examples with new type_id naming.
BryanRumsey Feb 21, 2022
13be2b8
Updated docs of new type_id naming. Refactored type referncing to re…
BryanRumsey Feb 21, 2022
f712974
Fixed failing test. Added test for string restrict_to.
BryanRumsey Feb 21, 2022
dc9fa9f
Merge branch 'code-cleanup' of https://github.com/StochSS/SpatialPy i…
BryanRumsey Feb 21, 2022
e7b0e4a
Updated examples.
BryanRumsey Feb 22, 2022
03e8a26
Updates to the type_id name scheme
BryanRumsey Feb 22, 2022
be7f9fd
Fixed broken tests.
BryanRumsey Feb 22, 2022
4e5043c
Added missing tests for restric_to.
BryanRumsey Feb 22, 2022
07fe9bd
Fixed broken species tests.
BryanRumsey Feb 22, 2022
5e8909f
Fixed broken species tests take 2.
BryanRumsey Feb 22, 2022
9352991
Fixed broken test models.
BryanRumsey Feb 22, 2022
773d3db
Merge branch 'code-cleanup' of https://github.com/StochSS/SpatialPy i…
seanebum Feb 22, 2022
ee3c2bd
rebuilding docs
seanebum Feb 22, 2022
df8f282
Merge branch 'code-cleanup' of https://github.com/StochSS/SpatialPy i…
BryanRumsey Feb 22, 2022
e6891c8
Final updates to the examples model.
BryanRumsey Feb 22, 2022
30b424f
Moved start here model to its correct location.
BryanRumsey Feb 22, 2022
ba292bb
Merge pull request #222 from StochSS/build-docs
briandrawert Feb 22, 2022
f22494d
Fixed bug with get_property when property name is 'v'.
BryanRumsey Feb 22, 2022
4e42cf9
Updates to start here example.
BryanRumsey Feb 22, 2022
6cbfa98
Merge pull request #219 from StochSS/example-cleanup
seanebum Feb 22, 2022
56a6892
Merge pull request #211 from StochSS/code-cleanup
briandrawert Feb 22, 2022
13b336a
Merge branch 'main' into develop
briandrawert Feb 22, 2022
81cdf10
Bumping version to 1.0
briandrawert Feb 22, 2022
2804389
Rebuilt docs for 1.0, added front page material
briandrawert Feb 23, 2022
ceaece4
cleanup, and add top level index.html for docs
briandrawert Feb 23, 2022
8dccf29
Created .nojekyll file
BryanRumsey Feb 23, 2022
0a37ca9
Start here update.
BryanRumsey Feb 23, 2022
ab3aabb
update to conf.py for img
seanebum Feb 23, 2022
b9a06d9
rebuilt docs
seanebum Feb 23, 2022
65ef760
Added fonts and css directories for docs.
BryanRumsey Feb 23, 2022
0d90273
Merge branch 'docs_updates' of https://github.com/StochSS/SpatialPy i…
BryanRumsey Feb 23, 2022
611a316
rebuild agian for css updates
seanebum Feb 23, 2022
f801a46
Final updates to the StartHere, Gravity, and Weir examples.
BryanRumsey Feb 24, 2022
93dbff5
Merge pull request #223 from StochSS/docs_updates
seanebum Feb 25, 2022
7d69891
Updates to the examples.
BryanRumsey Feb 25, 2022
33e0ba1
Merge branch 'develop' of https://github.com/StochSS/SpatialPy into d…
BryanRumsey Feb 25, 2022
c4a6918
Setup automatic docs build github action.
BryanRumsey Feb 25, 2022
b171cbd
Testing pygmsh dependancy requirement. Updated the meshio read call.
BryanRumsey Feb 28, 2022
7b92cb3
Removed the unnecessary pygmsh import. Update meshio dependent to v5…
BryanRumsey Feb 28, 2022
6cae727
Remove pygmsh import. Refactored the import_meshio_object function t…
BryanRumsey Feb 28, 2022
1147aed
Removed update docs action.
BryanRumsey Feb 28, 2022
e999c1d
Merge pull request #227 from StochSS/deps-update
briandrawert Feb 28, 2022
eca4d62
small doc update
seanebum Feb 28, 2022
34e781c
Merge pull request #124 from StochSS/develop
BryanRumsey Mar 1, 2022
3372f96
Fixed start here notebook name.
BryanRumsey Mar 1, 2022
a2585ed
Fixed doc strings for boundary conditions.
BryanRumsey Mar 1, 2022
05ad212
Fixed doc strings for boundary conditions.
BryanRumsey Mar 1, 2022
86c3647
Added a missing raises doc tag for data functions.
BryanRumsey Mar 1, 2022
4ca44ad
Updated docs in domain. updated docs.
BryanRumsey Mar 1, 2022
d5d489f
Updated docs in domain. updated docs.
BryanRumsey Mar 1, 2022
dffadb7
Updated docs in domain. updated docs.
BryanRumsey Mar 1, 2022
a9df60e
Updates to Geometry and Initial Condition docs.
BryanRumsey Mar 1, 2022
3fd6aa7
closes #225
briandrawert Mar 1, 2022
08b5a36
Updated docs.
BryanRumsey Mar 2, 2022
ac1c46b
Updated docs html files.
BryanRumsey Mar 2, 2022
a09f2e0
Updated docs for initial conditions and model.
BryanRumsey Mar 2, 2022
6e7d788
Updated docs html files.
BryanRumsey Mar 2, 2022
c142a95
Updated docs for reactions.
BryanRumsey Mar 2, 2022
b3639dd
Updated docs html files.
BryanRumsey Mar 2, 2022
0186da3
Updated docs for results.
BryanRumsey Mar 2, 2022
aaa1606
Updated docs html files.
BryanRumsey Mar 2, 2022
4a0d3d3
Updated docs for species.
BryanRumsey Mar 2, 2022
93511d4
Updated docs html files.
BryanRumsey Mar 2, 2022
5f41717
Updated docs for stochss export.
BryanRumsey Mar 2, 2022
dd077f1
Updated docs html files.
BryanRumsey Mar 2, 2022
e9edd02
Updated docs for solver.
BryanRumsey Mar 2, 2022
7d7f806
Updated docs html files.
BryanRumsey Mar 2, 2022
7b3f35d
Split tests into unit tests and integration tests. Added new test sc…
BryanRumsey Mar 4, 2022
e71ba96
updates to test 3d cylinder demo nb.
BryanRumsey Mar 7, 2022
a60534d
update to domain docs
seanebum Mar 7, 2022
553652e
added develop branch to integration test cation target.
BryanRumsey Mar 7, 2022
5d522c2
Merge pull request #233 from StochSS/split-tests
seanebum Mar 7, 2022
637527e
update link to example StartHere notebook
seanebum Mar 7, 2022
a345465
added explination of the validation plots
briandrawert Mar 7, 2022
774335d
Merge branch 'develop' of github.com:stochss/SpatialPy into develop
briandrawert Mar 7, 2022
02913a1
Merge pull request #229 from StochSS/doc-edits
briandrawert Mar 7, 2022
c5f0509
Merge pull request #232 from StochSS/develop
briandrawert Mar 7, 2022
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23 changes: 0 additions & 23 deletions .github/workflows/main.yml

This file was deleted.

30 changes: 30 additions & 0 deletions .github/workflows/run-integration-tests.yml
Original file line number Diff line number Diff line change
@@ -0,0 +1,30 @@
name: Run SpatialPy Integration Tests

on:
push:
branches: [staging, develop]

jobs:
run-tests:
runs-on: ${{ matrix.os }}
strategy:
matrix:
os: [ ubuntu-latest ]

steps:
- name: Initialize environment
uses: actions/checkout@v2

- name: Install Python
uses: actions/setup-python@v2
with:
python-version: '3.7'

- name: Install Python dependencies
run: |
python3 -m pip install --upgrade pip
python3 -m pip install -r requirements.txt
python3 -m pip install coverage

- name: Run tests
run: coverage run test/run_integration_tests.py
28 changes: 28 additions & 0 deletions .github/workflows/run-unit-tests.yml
Original file line number Diff line number Diff line change
@@ -0,0 +1,28 @@
name: Run SpatialPy Tests

on: [push]

jobs:
run-tests:
runs-on: ${{ matrix.os }}
strategy:
matrix:
os: [ ubuntu-latest ]

steps:
- name: Initialize environment
uses: actions/checkout@v2

- name: Install Python
uses: actions/setup-python@v2
with:
python-version: '3.7'

- name: Install Python dependencies
run: |
python3 -m pip install --upgrade pip
python3 -m pip install -r requirements.txt
python3 -m pip install coverage

- name: Run tests
run: coverage run test/run_unit_tests.py
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