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academic/root: Updated for version 6.30/08, removed gsl_shared flag. #7112

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reverse dependencies - academic/root

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✅ sbolint - academic/root ✅

sbolint: root checks out OK

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willysr commented Jul 11, 2024

@sbo-bot: build academic/root

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sbo-bot bot commented Jul 11, 2024

buildpkg i586 academic/root

Creating hintfile directory: /etc/repo/SBo/hintfiles
Checking whether git is clean ... yes.
Indexing SlackBuilds ... done.
git repo: /var/lib/repo/SBo/slackbuilds
branch:   HEAD
date:     Thu Jul 11 08:41:35 GMT 2024
revision: 1e684caf7580dc3579b49ebda820c0c6b2766bcf
title:    Merge 9b66bad9670bcdd522d84862bc698841a9c1ecce into b7617d38b15c667776a9b6ad2580f6b3156d1986

================================================================================
academic/root                                                           10:49:25
================================================================================

Calculating dependencies ... 
Hints for academic/root:
  OPTIONS="QT=no"
Dependency tree:
academic/root (update for version 6.30.08)
  libraries/tbb (ok)
  libraries/libAfterImage (ok)
  libraries/gl2ps (ok)
  libraries/ftgl (ok)
  development/python3-numpy (ok)
    python/python3-mesonpy (ok)
      python/python3-pyproject-metadata (ok)
        python/python3-wheel (ok)
          python/python3-installer (ok)
            python/python3-flit_core (ok)
        python/python3-build (ok)
          python/python3-pyproject-hooks (ok)
            python/python3-installer (ok)
              python/python3-flit_core (ok)
      python/python3-meson-opt (ok)
        python/python3-wheel (ok)
          python/python3-installer (ok)
            python/python3-flit_core (ok)
        python/python3-build (ok)
          python/python3-pyproject-hooks (ok)
            python/python3-installer (ok)
              python/python3-flit_core (ok)

Building academic/root (update for version 6.30.08) ------------------- 10:49:28
Testing SlackBuild files ... done.
Downloading source files ...
Verifying source files ... done.
Installing dependencies ...
python3-flit_core-3.9.0-i586-2_SBo: Simplified pkging of Python modules, [ 140K]
python3-installer-0.7.0-i586-1_SBo: Library for installing Python packag [ 1.1M]
python3-pyproject-hooks-1.0.0-i586-2_SBo: Wrappers to call PEP 517 build [ 110K]
python3-build-1.2.1-i586-1_SBo: a simple, correct PEP517 package builder [ 210K]
python3-wheel-0.43.0-i586-3_SBo: A built-package format for Python ..... [ 610K]
python3-meson-opt-1.4.1-noarch-1_SBo: meson installed to /opt .......... [ 9.2M]
python3-pyproject-metadata-0.8.0-i586-1_SBo: PEP 621 metadata parsing .. [  90K]
python3-mesonpy-0.15.0-i586-6_SBo: Meson Python build backend, PEP517 .. [ 240K]
python3-numpy-1.26.3-i586-2_SBo: Python3 extension for scientific comput [  43M]
ftgl-2.4.0-i586-2_SBo: font rendering library for OpenGL applications .. [ 590K]
gl2ps-1.3.7-i586-1_SBo: OpenGL to PostScript printing library .......... [ 510K]
libAfterImage-1.20-i586-2_SBo: Generic image manipulation library ...... [ 1.1M]
tbb-2021.10.0-i586-1_SBo: Intel Threading Building Blocks .............. [ 1.9M]
Running root.SlackBuild ...                                         ETA 11:22:??
env MAKEFLAGS='-j24 -l13' QT=no nice -n 5 bash ./root.SlackBuild
Build time 29 min, peak load 14.77, peak memory 6475M, peak tmp 2006M
academic/root: root.SlackBuild failed (status 2)                        11:19:10
Call Stack (most recent call first):
-- Looking for pthread_create in pthreads - not found
Call Stack (most recent call first):
-- Looking for Fortran sgemm - not found
-- Looking for Fortran sgemm - not found
-- Not building amdgpu-arch: hsa-runtime64 not found
Call Stack (most recent call first):
-- Looking for m - not found
-- RapidYAML not found, only compiling RooFit with nlohmann-json parser
Call Stack (most recent call first):
Call Stack (most recent call first):
  176 |                       "mmap_morecore error: base memory location (%p) is not aligned with %zu as required.
",
make[2]: *** [CMakeFiles/hsimple.dir/build.make:79: tutorials/hsimple.root] Error 129
make[1]: *** [CMakeFiles/Makefile2:9049: CMakeFiles/hsimple.dir/all] Error 2
make: *** [Makefile:156: all] Error 2
See /var/log/repo/SBo/academic/root/build.log
Unmounting chroot ... done.
⛔️ academic/root FAILED ⛔️

================================================================================
SUMMARY                                                                 11:19:11
================================================================================

Logfile:     /var/log/repo/SBo/repo_2024-07-11_10:49:25.log
Runtime:     0h 29m 47s
Failed:      1
  academic/root

Snipped Build Failure

[ 97%] Building CXX object graf3d/eve/CMakeFiles/Eve.dir/src/TEveTrackEditor.cxx.o
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In file included from /tmp/SBo/repo.IwYeqW/build_root/root-6.30.08/src/tmva/sofie/inc/TMVA/OperatorList.hxx:15,
                 from /tmp/SBo/repo.IwYeqW/build_root/root-6.30.08/src/tmva/pymva/inc/TMVA/RModelParser_Keras.h:31,
                 from /tmp/SBo/repo.IwYeqW/build_root/root-6.30.08/src/tmva/pymva/src/RModelParser_Keras.cxx:20:
/tmp/SBo/repo.IwYeqW/build_root/root-6.30.08/src/tmva/sofie/inc/TMVA/ROperator_Reshape.hxx: In instantiation of ‘std::vector<std::vector<unsigned int> > TMVA::Experimental::SOFIE::ROperator_Reshape<T>::ShapeInference(std::vector<std::vector<unsigned int> >) [with T = float]’:
/tmp/SBo/repo.IwYeqW/build_root/root-6.30.08/src/tmva/sofie/inc/TMVA/ROperator_Reshape.hxx:62:37:   required from here
/tmp/SBo/repo.IwYeqW/build_root/root-6.30.08/src/tmva/sofie/inc/TMVA/ROperator_Reshape.hxx:73:102: warning: comparison is always false due to limited range of data type [-Wtype-limits]
   73 |             if (output_shape.size() > 1 && ((output_length == 0 && fAllowZero == 0) || output_length > INT64_MAX)) {
      |                                                                                                      ^
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[100%] Building CXX object roofit/roostats/CMakeFiles/RooStats.dir/src/ToyMCImportanceSampler.cxx.o
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[100%] Building CXX object roofit/roostats/CMakeFiles/RooStats.dir/src/UpperLimitMCSModule.cxx.o
[100%] Linking CXX shared library ../../lib/libRooStats.so
[100%] Built target RooStats
[100%] Generating G__HistFactory.cxx, ../../lib/HistFactory.pcm
Scanning dependencies of target G__HistFactory
[100%] Building CXX object roofit/histfactory/CMakeFiles/G__HistFactory.dir/G__HistFactory.cxx.o
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[100%] Building CXX object roofit/histfactory/CMakeFiles/HistFactory.dir/src/Asimov.cxx.o
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[100%] Building CXX object roofit/histfactory/CMakeFiles/HistFactory.dir/src/RooBarlowBeestonLL.cxx.o
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[100%] Linking CXX shared library ../../lib/libHistFactory.so
[100%] Built target HistFactory
[100%] Generating ../../ginclude/hist2workspaceCommandLineOptionsHelp.h
[100%] Building CXX object roofit/hs3/CMakeFiles/RooFitHS3.dir/src/JSONIO.cxx.o
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[100%] Linking CXX executable ../../bin/hist2workspace
[100%] Built target hist2workspace
[100%] Linking CXX shared library ../../lib/libRooFitHS3.so
[100%] Built target RooFitHS3
[100%] Building CXX object roofit/xroofit/CMakeFiles/RooFitXRooFit.dir/src/Asymptotics.cxx.o
[100%] Building CXX object roofit/xroofit/CMakeFiles/RooFitXRooFit.dir/src/xRooNode.cxx.o
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[100%] Building CXX object roofit/xroofit/CMakeFiles/RooFitXRooFit.dir/src/xRooNode_interactive.cxx.o
[100%] Building CXX object roofit/xroofit/CMakeFiles/RooFitXRooFit.dir/src/xRooNLLVar.cxx.o
/tmp/SBo/repo.IwYeqW/build_root/root-6.30.08/src/roofit/xroofit/src/xRooNode.cxx: In function ‘std::string ROOT::Experimental::XRooFit::cling::printValue(const ROOT::Experimental::XRooFit::xRooNode*)’:
/tmp/SBo/repo.IwYeqW/build_root/root-6.30.08/src/roofit/xroofit/src/xRooNode.cxx:10625:48: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=]
10625 |             out += TString::Format(",... and %lu more",left);
      |                                              ~~^       ~~~~
      |                                                |       |
      |                                                |       size_t {aka unsigned int}
      |                                                long unsigned int
      |                                              %u
[100%] Linking CXX shared library ../../lib/libRooFitXRooFit.so
[100%] Built target RooFitXRooFit
[100%] Generating lib/modules.idx
[100%] Built target onepcm

[100%] Built target modules_idx
[100%] Generating tutorials/hsimple.root

Processing hsimple.C...
hsimple   : Real Time =   0.07 seconds Cpu Time =   0.07 seconds

 *** Break *** segmentation violation
make[2]: *** [CMakeFiles/hsimple.dir/build.make:79: tutorials/hsimple.root] Error 129
make[2]: *** Deleting file 'tutorials/hsimple.root'
make[1]: *** [CMakeFiles/Makefile2:9049: CMakeFiles/hsimple.dir/all] Error 2
make: *** [Makefile:156: all] Error 2
Build time 29 min, peak load 14.77, peak memory 6475M, peak tmp 2006M
academic/root: root.SlackBuild failed (status 2)                        11:19:10
Unmounting chroot ... 
:-( academic/root FAILED )-:

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willysr commented Jul 11, 2024

@arabusov this failed to build

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sbo-bot bot commented Jul 11, 2024

buildpkg x86_64 academic/root

Creating hintfile directory: /etc/repo/SBo/hintfiles
Checking whether git is clean ... yes.
Indexing SlackBuilds ... done.
git repo: /var/lib/repo/SBo/slackbuilds
branch:   HEAD
date:     Thu Jul 11 08:41:35 GMT 2024
revision: 1e684caf7580dc3579b49ebda820c0c6b2766bcf
title:    Merge 9b66bad9670bcdd522d84862bc698841a9c1ecce into b7617d38b15c667776a9b6ad2580f6b3156d1986

================================================================================
academic/root                                                           11:19:59
================================================================================

Calculating dependencies ... 
Hints for academic/root:
  OPTIONS="QT=no"
Dependency tree:
academic/root (update for version 6.30.08)
  libraries/tbb (ok)
  libraries/libAfterImage (ok)
  libraries/gl2ps (ok)
  libraries/ftgl (ok)
  development/python3-numpy (ok)
    python/python3-mesonpy (ok)
      python/python3-pyproject-metadata (ok)
        python/python3-wheel (ok)
          python/python3-installer (ok)
            python/python3-flit_core (ok)
        python/python3-build (ok)
          python/python3-pyproject-hooks (ok)
            python/python3-installer (ok)
              python/python3-flit_core (ok)
      python/python3-meson-opt (ok)
        python/python3-wheel (ok)
          python/python3-installer (ok)
            python/python3-flit_core (ok)
        python/python3-build (ok)
          python/python3-pyproject-hooks (ok)
            python/python3-installer (ok)
              python/python3-flit_core (ok)

Building academic/root (update for version 6.30.08) ------------------- 11:20:01
Testing SlackBuild files ... done.
Downloading source files ...
Verifying source files ... done.
Installing dependencies ...
python3-flit_core-3.9.0-x86_64-2_SBo: Simplified pkging of Python module [ 140K]
python3-installer-0.7.0-x86_64-5_SBo: Library for installing Python pack [ 1.1M]
python3-pyproject-hooks-1.0.0-x86_64-3_SBo: Wrappers to call PEP 517 bui [ 110K]
python3-build-1.2.1-x86_64-3_SBo: a simple, correct PEP517 package build [ 210K]
python3-wheel-0.43.0-x86_64-1_SBo: A built-package format for Python ... [ 610K]
python3-meson-opt-1.4.1-noarch-1_SBo: meson installed to /opt .......... [ 9.2M]
python3-pyproject-metadata-0.8.0-x86_64-1_SBo: PEP 621 metadata parsing  [  90K]
python3-mesonpy-0.15.0-x86_64-7_SBo: Meson Python build backend, PEP517  [ 240K]
python3-numpy-1.26.3-x86_64-2_SBo: Python3 extension for scientific comp [  44M]
ftgl-2.4.0-x86_64-2_SBo: font rendering library for OpenGL applications  [ 610K]
gl2ps-1.3.7-x86_64-1_SBo: OpenGL to PostScript printing library ........ [ 550K]
libAfterImage-1.20-x86_64-2_SBo: Generic image manipulation library .... [ 1.2M]
tbb-2021.10.0-x86_64-1_SBo: Intel Threading Building Blocks ............ [ 1.9M]
Running root.SlackBuild ...                                         ETA 11:52:??
env MAKEFLAGS='-j24 -l13' QT=no nice -n 5 bash ./root.SlackBuild
Build time 31 min, peak load 14.45, peak memory 9316M, peak tmp 2622M
Built ok:  root-6.30.08-x86_64-1_SBo.txz                                11:51:48
Testing package root-6.30.08-x86_64-1_SBo.txz ... done.
Test installing root-6.30.08-x86_64-1_SBo.txz ...
root-6.30.08-x86_64-1_SBo: data analysis framework ..................... [ 649M]
  Running profile script: /etc/profile.d/root.sh
Unmounting chroot ... done.
Backed up: root-6.28.08-x86_64-1_SBo.txz
✅ academic/root Updated for version 6.30.08 ✅

================================================================================
SUMMARY                                                                 11:52:34
================================================================================

Logfile:     /var/log/repo/SBo/repo_2024-07-11_11:19:58.log
Runtime:     0h 32m 36s
Updated:     1
  academic/root/root-6.30.08-x86_64-1_SBo.txz

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sbo-bot bot commented Jul 11, 2024

sbopkglint x86_64 academic/root

Installing dependency: python3-flit_core
python3-flit_core-3.9.0-x86_64-2_SBo: Simplified pkging of Python module [ 140K]

Installing dependency: python3-installer
python3-installer-0.7.0-x86_64-5_SBo: Library for installing Python pack [ 1.1M]

Installing dependency: python3-pyproject-hooks
python3-pyproject-hooks-1.0.0-x86_64-3_SBo: Wrappers to call PEP 517 bui [ 110K]

Installing dependency: python3-build
python3-build-1.2.1-x86_64-3_SBo: a simple, correct PEP517 package build [ 210K]

Installing dependency: python3-wheel
python3-wheel-0.43.0-x86_64-1_SBo: A built-package format for Python ... [ 610K]

Installing dependency: python3-meson-opt
python3-meson-opt-1.4.1-noarch-1_SBo: meson installed to /opt .......... [ 9.2M]

Installing dependency: python3-pyproject-metadata
python3-pyproject-metadata-0.8.0-x86_64-1_SBo: PEP 621 metadata parsing  [  90K]

Installing dependency: python3-mesonpy
python3-mesonpy-0.15.0-x86_64-7_SBo: Meson Python build backend, PEP517  [ 240K]

Installing dependency: python3-numpy
python3-numpy-1.26.3-x86_64-2_SBo: Python3 extension for scientific comp [  44M]

Installing dependency: ftgl
ftgl-2.4.0-x86_64-2_SBo: font rendering library for OpenGL applications  [ 610K]

Installing dependency: gl2ps
gl2ps-1.3.7-x86_64-1_SBo: OpenGL to PostScript printing library ........ [ 550K]

Installing dependency: libAfterImage
libAfterImage-1.20-x86_64-2_SBo: Generic image manipulation library .... [ 1.2M]

Installing dependency: tbb
tbb-2021.10.0-x86_64-1_SBo: Intel Threading Building Blocks ............ [ 1.9M]

Using tests from /usr/share/sbo-maintainer-tools/sbopkglint.d
Exploding /var/lib/repo/SBo/packages/15.0/x86_64/academic/root/root-6.30.08-x86_64-1_SBo.txz to /tmp/SBo/sbopkglint.3EoC3m ...OK
Running pre-doinst test...OK
Installing /var/lib/repo/SBo/packages/15.0/x86_64/academic/root/root-6.30.08-x86_64-1_SBo.txz to /tmp/SBo/sbopkglint.3EoC3m ...OK
Running test: 05-basic-sanity...
--- forbidden directory exists: etc/ld.so.conf.d
--- forbidden file: etc/ld.so.conf
___ note: package contains empty dirs, are these necessary?
drwxr-xr-x 2 root root 6 Jul 11 11:49 ./opt/ROOT-6.30.08/geom/gdml/doc
FAILED
Running test: 10-docs...OK
Running test: 15-noarch...OK
Running test: 20-arch...OK
Running test: 25-lafiles...OK
Running test: 30-manpages...OK
Running test: 35-desktop...OK
Running test: 40-newconfig...OK
Running test: 45-doinst...OK
Running test: 50-icons...OK
Running test: 60-usr_info...OK
Running test: 65-python...OK
Running test: 70-tmp_path...OK
Running test: 75-static_libs...OK
Running test: 85-perl...OK
⛔️ !!! root-6.30.08-x86_64-1_SBo.txz: 2 failures ⛔️

@arabusov
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@arabusov this failed to build

It seems 32 bits are broken.

@arabusov
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@willysr what access rights are required for /etc/ld.so.conf and /etc/ld.so.conf.d? On my system I have 644 and 755, shall I set them explicitly in the Slackbuild?

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willysr commented Jul 11, 2024

that's the correct permission

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willysr commented Jul 11, 2024

i think you can mark it as x86_64 only

@arabusov
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that's the correct permission

Ok. But why the "sanity" test reports

--- forbidden directory exists: etc/ld.so.conf.d
--- forbidden file: etc/ld.so.conf

@willysr
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willysr commented Jul 12, 2024

you need to ask Urchlay for that. He is the one that build the sbolint and sbopkglint tool

@arabusov
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arabusov commented Jul 12, 2024

i think you can mark it as x86_64 only

Occasionally, I use TP X31, a very nice machine, and it would be nice to have ROOT there as well. I'll try to figure out why it fails with newer ROOT versions. Btw, the ROOT team managed to compile it for 32 bit Windows: https://root.cern/releases/release-63008/

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willysr commented Jul 13, 2024

i will merge this with x86_64 only for now.

@willysr willysr closed this Jul 13, 2024
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