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Updated Changelog
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Hammarn committed Oct 10, 2017
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# NGI-RNAseq

## 1.3dev
## [1.3](https://github.com/SciLifeLab/NGI-RNAseq/releases/tag/1.3) - 2017-10-10

* Updated HISAT2 from v2.0.5 to v2.1.0
* Uses `--new-summary` and `--summary-file` to give output that will work with MultiQC,
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* Software versions are now collected at run time and added to MultiQC and pipeline reports.
* RSeQC has been refactored, and geneBody_coverage.py moved into it's own process.
* The way config files work has been changed. Config settings are now inherited from `base.config` instead of `uppmax.config`
* igenome.config needs to be last in the profile definition for the inhertence to work properly


## [1.2](https://github.com/SciLifeLab/NGI-RNAseq/releases/tag/1.2) - 2017-06-13
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