Merge pull request #354 from nickgros/bump-deps

Sage-Bionetworks · Jul 11, 2023 · 1000526 · 1000526
2 parents 3e21e0a + 0bb8ed3
commit 1000526
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diff --git a/.github/workflows/sbom.yml b/.github/workflows/sbom.yml
@@ -5,11 +5,10 @@ name: SBOM upload
 
 on:
   push:
-    branches: ["main"]
+    branches: ['main']
 
 jobs:
   SBOM-upload:
-
     runs-on: ubuntu-latest
     permissions:
       id-token: write
@@ -28,6 +27,6 @@ jobs:
           name: sbom
           path: _manifest/spdx_2.2
       - name: SBOM upload
-        uses: jhutchings1/spdx-to-dependency-graph[email protected].2
+        uses: advanced-security/spdx-dependency-submission[email protected].1
         with:
-          filePath: "_manifest/spdx_2.2/"
+          filePath: '_manifest/spdx_2.2/'
diff --git a/apps/SageAccountWeb/package.json b/apps/SageAccountWeb/package.json
@@ -5,48 +5,47 @@
   "private": true,
   "dependencies": {
     "@emotion/core": "^11.0.0",
-    "@emotion/react": "^11.10.6",
-    "@emotion/styled": "^11.10.6",
-    "@mui/icons-material": "^5.11.16",
-    "@mui/material": "^5.11.16",
-    "@mui/system": "^5.11.16",
-    "@mui/utils": "^5.11.13",
+    "@emotion/react": "^11.11.1",
+    "@emotion/styled": "^11.11.0",
+    "@mui/icons-material": "^5.13.7",
+    "@mui/material": "^5.13.7",
+    "@mui/system": "^5.13.7",
+    "@mui/utils": "^5.13.7",
     "lodash-es": "^4.17.21",
-    "plotly.js-basic-dist": "^2.22.0",
+    "plotly.js-basic-dist": "^2.24.3",
     "react": "18.2.0",
-    "react-bootstrap": "^1.5.2",
+    "react-bootstrap": "^1.6.7",
     "react-cookie": "4.0.0",
     "react-dom": "18.2.0",
-    "react-easy-crop": "^4.2.0",
-    "react-query": "3.39.1",
-    "react-router-dom": "5.3.3",
-    "react-spinners": "^0.11.0",
-    "react-use": "^17.3.1",
-    "sass": "^1.30.0",
+    "react-easy-crop": "^4.7.5",
+    "react-query": "3.39.3",
+    "react-router-dom": "^5.3.4",
+    "react-use": "^17.4.0",
+    "sass": "^1.63.6",
     "synapse-react-client": "workspace:*",
-    "universal-cookie": "^4.0.3"
+    "universal-cookie": "^4.0.4"
   },
   "devDependencies": {
     "@sage-bionetworks/synapse-types": "workspace:*",
-    "@testing-library/react": "^13.3.0",
+    "@testing-library/react": "^13.4.0",
     "@testing-library/user-event": "^14.4.3",
     "@types/katex": "^0.5.0",
-    "@types/node": "^18.16.12",
-    "@types/plotly.js": "^2.12.18",
-    "@types/react": "18.0.17",
+    "@types/node": "^18.16.19",
+    "@types/plotly.js": "^2.12.22",
+    "@types/react": "18.0.27",
     "@types/react-dom": "18.0.6",
     "@types/react-easy-crop": "^2.0.0",
     "@types/react-plotly.js": "^2.6.0",
-    "@types/react-router-dom": "^5.1.7",
+    "@types/react-router-dom": "^5.3.3",
     "@types/react-tooltip": "^4.2.4",
-    "@vitest/coverage-c8": "^0.31.0",
-    "@vitest/ui": "^0.31.0",
+    "@vitest/coverage-c8": "^0.33.0",
+    "@vitest/ui": "^0.33.0",
     "assert": "^2.0.0",
     "buffer": "^6.0.3",
     "https-browserify": "^1.0.0",
     "identity-obj-proxy": "^3.0.0",
-    "jsdom": "^21.1.1",
-    "katex": "^0.10.0-rc.1",
+    "jsdom": "^21.1.2",
+    "katex": "^0.10.2",
     "markdown-it": "^13.0.1",
     "markdown-it-br": "^1.0.0",
     "markdown-it-center-text": "^1.0.4",
@@ -56,27 +55,27 @@
     "markdown-it-strikethrough-alt": "^1.0.0",
     "markdown-it-sub-alt": "^1.0.0",
     "markdown-it-sup-alt": "^1.0.2",
-    "markdown-it-synapse": "^1.1.7",
+    "markdown-it-synapse": "workspace:^",
     "markdown-it-synapse-heading": "^1.0.1",
-    "markdown-it-synapse-math": "^3.0.4",
+    "markdown-it-synapse-math": "^3.0.5",
     "markdown-it-synapse-table": "^1.0.6",
-    "memfs": "^3.4.7",
+    "memfs": "^3.5.3",
     "path-browserify": "^1.0.1",
     "pluralize": "^8.0.0",
-    "prettier": "^2.6.2",
+    "prettier": "^2.8.8",
     "process": "^0.11.10",
-    "source-map-explorer": "^2.5.2",
+    "source-map-explorer": "^2.5.3",
     "stream-browserify": "^3.0.0",
     "stream-http": "^3.2.0",
     "timers-browserify": "^2.0.12",
-    "tslib": "^2.3.1",
-    "type-fest": "^3.7.2",
-    "typescript": "5.0.4",
-    "url": "^0.11.0",
-    "util": "^0.12.4",
-    "vite": "^4.3.4",
+    "tslib": "^2.6.0",
+    "type-fest": "^3.13.0",
+    "typescript": "5.1.6",
+    "url": "^0.11.1",
+    "util": "^0.12.5",
+    "vite": "^4.4.2",
     "vite-config": "workspace:*",
-    "vitest": "^0.31.0",
+    "vitest": "^0.33.0",
     "whatwg-fetch": "^3.6.2"
   },
   "scripts": {
@@ -103,14 +102,6 @@
       "last 1 safari version"
     ]
   },
-  "resolutions": {
-    "js-yaml": "3.13.1",
-    "react": "18.2.0",
-    "react-hot-toast": "2.2.0",
-    "@types/react": "18.0.17",
-    "@types/react-dom": "18.0.6",
-    "minimatch": "^3.1.2"
-  },
   "lint-staged": {
     "*.{js,jsx,ts,tsx,json,yml,scss,css,md}": "prettier --config .prettierrc --write"
   }

diff --git a/apps/portals/package.json b/apps/portals/package.json
@@ -4,27 +4,27 @@
   "private": true,
   "type": "module",
   "dependencies": {
-    "@emotion/react": "^11.10.6",
-    "@emotion/styled": "^11.10.6",
-    "@mui/icons-material": "^5.11.16",
-    "@mui/material": "^5.11.16",
-    "@sage-bionetworks/react-base-table": "^1.13.2",
+    "@emotion/react": "^11.11.1",
+    "@emotion/styled": "^11.11.0",
+    "@mui/icons-material": "^5.13.7",
+    "@mui/material": "^5.13.7",
+    "@sage-bionetworks/react-base-table": "^1.13.4",
     "clone-deep": "^4.0.1",
-    "dayjs": "^1.11.6",
+    "dayjs": "^1.11.9",
     "lodash": "^4.17.21",
     "lodash-es": "^4.17.21",
-    "plotly.js-basic-dist": "^2.22.0",
+    "plotly.js-basic-dist": "^2.24.3",
     "react": "^18.2.0",
-    "react-bootstrap": "^1.5.2",
+    "react-bootstrap": "^1.6.7",
     "react-cookie": "4.0.0",
     "react-dom": "^18.2.0",
     "react-plotly.js": "^2.6.0",
-    "react-query": "3.39.1",
-    "react-router-dom": "^5.3.3",
+    "react-query": "3.39.3",
+    "react-router-dom": "^5.3.4",
     "react-spinners": "^0.13.8",
     "react-switch": "^7.0.0",
-    "react-use": "^17.3.1",
-    "sass": "^1.30.0",
+    "react-use": "^17.4.0",
+    "sass": "^1.63.6",
     "synapse-react-client": "workspace:*"
   },
   "scripts": {
@@ -43,25 +43,25 @@
   "devDependencies": {
     "@sage-bionetworks/synapse-types": "workspace:*",
     "@testing-library/jest-dom": "^5.16.5",
-    "@testing-library/react": "^13.3.0",
+    "@testing-library/react": "^13.4.0",
     "@testing-library/user-event": "^14.4.3",
     "@types/katex": "^0.5.0",
-    "@types/lodash": "^4.14.191",
-    "@types/node": "^18.16.12",
-    "@types/plotly.js": "^2.12.18",
-    "@types/react": "^18.0.17",
-    "@types/react-dom": "^18.0.6",
+    "@types/lodash": "^4.14.195",
+    "@types/node": "^18.16.19",
+    "@types/plotly.js": "^2.12.22",
+    "@types/react": "18.0.27",
+    "@types/react-dom": "^18.2.6",
     "@types/react-plotly.js": "^2.6.0",
     "@types/react-router-dom": "^5.3.3",
-    "@vitest/coverage-c8": "^0.31.0",
-    "@vitest/ui": "^0.31.0",
-    "@vitest/utils": "^0.31.1",
+    "@vitest/coverage-c8": "^0.33.0",
+    "@vitest/ui": "^0.33.0",
+    "@vitest/utils": "^0.33.0",
     "assert": "^2.0.0",
     "buffer": "^6.0.3",
     "https-browserify": "^1.0.0",
     "identity-obj-proxy": "^3.0.0",
-    "jsdom": "^21.1.1",
-    "katex": "^0.10.0-rc.1",
+    "jsdom": "^21.1.2",
+    "katex": "^0.10.2",
     "markdown-it": "^13.0.1",
     "markdown-it-br": "^1.0.0",
     "markdown-it-center-text": "^1.0.4",
@@ -71,26 +71,26 @@
     "markdown-it-strikethrough-alt": "^1.0.0",
     "markdown-it-sub-alt": "^1.0.0",
     "markdown-it-sup-alt": "^1.0.2",
-    "markdown-it-synapse": "^1.1.10",
+    "markdown-it-synapse": "workspace:^",
     "markdown-it-synapse-heading": "^1.0.1",
-    "markdown-it-synapse-math": "^3.0.4",
+    "markdown-it-synapse-math": "^3.0.5",
     "markdown-it-synapse-table": "^1.0.6",
-    "memfs": "^3.4.7",
+    "memfs": "^3.5.3",
     "path-browserify": "^1.0.1",
     "pluralize": "^8.0.0",
     "postcss-normalize": "^10.0.1",
     "process": "^0.11.10",
-    "source-map-explorer": "^2.5.2",
+    "source-map-explorer": "^2.5.3",
     "stream-browserify": "^3.0.0",
     "stream-http": "^3.2.0",
     "timers-browserify": "^2.0.12",
-    "tslib": "^2.3.1",
-    "typescript": "5.0.4",
-    "url": "^0.11.0",
-    "util": "^0.12.4",
-    "vite": "^4.3.4",
+    "tslib": "^2.6.0",
+    "typescript": "5.1.6",
+    "url": "^0.11.1",
+    "util": "^0.12.5",
+    "vite": "^4.4.2",
     "vite-config": "workspace:*",
-    "vitest": "^0.31.0",
+    "vitest": "^0.33.0",
     "whatwg-fetch": "^3.6.2"
   },
   "browserslist": {
@@ -108,13 +108,5 @@
       "last 1 firefox version",
       "last 1 safari version"
     ]
-  },
-  "resolutions": {
-    "goober": "2.1.9",
-    "js-yaml": "3.13.1",
-    "react": "18.2.0",
-    "react-hot-toast": "2.2.0",
-    "@types/react": "^18.0.17",
-    "minimatch": "^3.1.2"
   }
 }