RRes ETL, fixing issue with Neo dump.

Rothamsted · Feb 10, 2024 · 409574a · 409574a
1 parent e556779
commit 409574a
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Showing 2 changed files with 4 additions and 1 deletion.
diff --git a/rres-endpoints/config/datasets/poaceae-sample-1-cfg.sh b/rres-endpoints/config/datasets/poaceae-sample-1-cfg.sh
@@ -6,6 +6,7 @@ export KETL_SRC_OXL="${KETL_OUT}/tmp/${KETL_DATASET_ID}.oxl"
 
 # Neo 
 export KETL_HAS_NEO4J=true
+export KETL_NEO_VERSION='5.16.0'
 export NEO4J_HOME="/tmp/neo4j-community-$KETL_NEO_VERSION"
 
 # Knet Initialiser

diff --git a/rres-endpoints/endpoint-steps/neo-dump.sh b/rres-endpoints/endpoint-steps/neo-dump.sh
@@ -37,6 +37,8 @@ EOT
 fi
 
 echo -e "\n  Neo4j Dump to '$neo_dump'\n"
-"$NEO4J_HOME/bin/neo4j-admin" database dump --to-stdout neo4j --verbose >"$neo_dump"
+# WARNING!!! DO NOT USE --verbose!!! It sends diagnostic messages to the
+# standard output!!! See: https://github.com/neo4j/neo4j/issues/13397
+"$NEO4J_HOME/bin/neo4j-admin" database dump --to-stdout neo4j >"$neo_dump"
 
 echo -e "\n  Neo4j Dump done\n"