Small refactorings on combine.seq.3 and general adaptive.bin

[hechth]

Refactored the combine.seq.3 function to only use dplyr to summarize the data (as this is what it actually does) and generally renamed some variables in adaptive.bin and proc.cdf

[codecov]

Codecov Report

Patch coverage: 100.00% and project coverage change: -0.53 ⚠️

Comparison is base (463e1cd) 66.65% compared to head (4911868) 66.13%.

❗ Current head 4911868 differs from pull request most recent head a555966. Consider uploading reports for the commit a555966 to get more accurate results

Additional details and impacted files

@@            Coverage Diff             @@
##           master     #196      +/-   ##
==========================================
- Coverage   66.65%   66.13%   -0.53%     
==========================================
  Files          23       23              
  Lines        2624     2616       -8     
==========================================
- Hits         1749     1730      -19     
- Misses        875      886      +11     

Impacted Files	Coverage Δ
R/compute_clusters.R	81.63% <ø> (ø)
R/adaptive.bin.R	100.00% <100.00%> (ø)
R/aggregate_by_rt.R	100.00% <100.00%> (ø)
R/recover.weaker.R	98.32% <100.00%> (ø)
R/remove_noise.R	58.33% <100.00%> (-22.92%)	⬇️
R/run_filter.R	100.00% <100.00%> (ø)
R/utils.R	90.12% <100.00%> (ø)

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