Add pthread library to fix arm64 building #29
Workflow file for this run
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| name: Deploy containers | |
| on: | |
| #release: | |
| # types: [published] | |
| workflow_dispatch: | |
| push: | |
| branches: | |
| - "build-containers" | |
| # Rembember: you have to escape characters like $ with \$. | |
| env: | |
| SETUP_BASE: | | |
| apt-get -qq update > /dev/null; | |
| apt-get -qq upgrade > /dev/null; | |
| apt-get -qq install wget git > /dev/null; | |
| useradd -ms /bin/bash pyompuser; | |
| su pyompuser; | |
| cd /home/pyompuser; | |
| SETUP_MINICONDA: | | |
| wget -q https://repo.anaconda.com/miniconda/Miniconda3-latest-Linux-\$(uname -m).sh -O miniconda.sh; | |
| bash miniconda.sh -b -u -p ./miniconda3; | |
| rm -rf miniconda.sh; | |
| export PATH=/home/pyompuser/miniconda3/bin:\${PATH}; | |
| conda install -y -c conda-forge conda-build conda-verify anaconda-client; | |
| conda config --set anaconda_upload yes; | |
| SETUP_REPO: | | |
| git clone https://github.com/Python-for-HPC/PyOMP; | |
| cd PyOMP; | |
| # TODO: remove this line when the project is ready for deployment | |
| git switch build-containers; | |
| #git checkout \$(git describe --abbrev=0 --tags); | |
| export GITHUB_HEAD_SHA=\$(git rev-parse --short HEAD); | |
| jobs: | |
| #conda-deploy-llvm-openmp-dev-linux-arm64: | |
| # name: llvm-openmp-dev linux-arm64 | |
| # runs-on: ubuntu-latest | |
| # steps: | |
| # - name: Set up QEMU | |
| # uses: docker/setup-qemu-action@v3 | |
| # with: | |
| # platforms: linux/arm64 | |
| # - name: Deploy llvm-openmp-dev | |
| # run: | | |
| # docker run --platform linux/arm64 ubuntu:22.04 /bin/bash -xel -c " | |
| # ${{ env.SETUP_BASE }} | |
| # ${{ env.SETUP_MINICONDA }} | |
| # ${{ env.SETUP_REPO }} | |
| # conda build --user python-for-hpc --label main \ | |
| # -c python-for-hpc -c conda-forge \ | |
| # --token ${{ secrets.ANACONDA_TOKEN }} \ | |
| # buildscripts/conda-recipes/llvm-openmp-dev; | |
| # " | |
| #conda-deploy-llvmlite-linux-arm64: | |
| # needs: conda-deploy-llvm-openmp-dev-linux-arm64 | |
| # name: llvmlite linux-arm64 | |
| # runs-on: ubuntu-latest | |
| # strategy: | |
| # matrix: | |
| # python-version: ["3.8", "3.9", "3.10"] | |
| # steps: | |
| # - name: Set up QEMU | |
| # uses: docker/setup-qemu-action@v3 | |
| # with: | |
| # platforms: linux/arm64 | |
| # - name: Deploy llvmlite | |
| # run: | | |
| # docker run --platform linux/arm64 ubuntu:22.04 /bin/bash -el -c " | |
| # ${{ env.SETUP_BASE }} | |
| # ${{ env.SETUP_MINICONDA }} | |
| # ${{ env.SETUP_REPO }} | |
| # conda build --user python-for-hpc --label main \ | |
| # -c python-for-hpc -c conda-forge \ | |
| # --python ${{ matrix.python-version}} --token ${{ secrets.ANACONDA_TOKEN }} \ | |
| # buildscripts/conda-recipes/llvmlite | |
| # " | |
| conda-deploy-numba-linux-arm64: | |
| #needs: conda-deploy-llvmlite-linux-arm64 | |
| name: numba linux-arm64 | |
| runs-on: ubuntu-latest | |
| strategy: | |
| matrix: | |
| python-version: ["3.8", "3.9", "3.10"] | |
| steps: | |
| - name: Set up QEMU | |
| uses: docker/setup-qemu-action@v3 | |
| with: | |
| platforms: linux/arm64 | |
| - name: Deploy numba | |
| run: | | |
| docker run --platform linux/arm64 ubuntu:22.04 /bin/bash -el -c " | |
| ${{ env.SETUP_BASE }} | |
| ${{ env.SETUP_MINICONDA }} | |
| ${{ env.SETUP_REPO }} | |
| conda build --user python-for-hpc --label main \ | |
| -c python-for-hpc -c conda-forge \ | |
| --python ${{ matrix.python-version}} --token ${{ secrets.ANACONDA_TOKEN }} \ | |
| buildscripts/conda-recipes/numba; | |
| " | |
| conda-deploy-pyomp-linux-arm64: | |
| needs: conda-deploy-numba-linux-arm64 | |
| name: pyomp linux-arm64 | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Set up QEMU | |
| uses: docker/setup-qemu-action@v3 | |
| with: | |
| platforms: linux/arm64 | |
| - name: Deploy pyomp | |
| run: | | |
| docker run --platform linux/arm64 ubuntu:22.04 /bin/bash -el -c " | |
| ${{ env.SETUP_BASE }} | |
| ${{ env.SETUP_MINICONDA }} | |
| ${{ env.SETUP_REPO }} | |
| conda build --user python-for-hpc --label main \ | |
| -c python-for-hpc -c conda-forge \ | |
| --token ${{ secrets.ANACONDA_TOKEN }} \ | |
| buildscripts/conda-recipes/pyomp; | |
| " | |
| #create-containers: | |
| # runs-on: ubuntu-latest | |
| # steps: | |
| # - name: Set up QEMU | |
| # uses: docker/setup-qemu-action@v3 | |
| # | |
| # - name: Set up Docker Buildx | |
| # uses: docker/setup-buildx-action@v3 | |
| # | |
| # - name: Login to GitHub Container Registry | |
| # uses: docker/login-action@v3 | |
| # with: | |
| # registry: ghcr.io | |
| # username: ${{ github.actor }} | |
| # password: ${{ secrets.GITHUB_TOKEN }} | |
| # | |
| # - name: Build and push | |
| # uses: docker/build-push-action@v6 | |
| # with: | |
| # platforms: linux/amd64,linux/arm64 | |
| # file: buildscripts/containers/Dockerfile.terminal | |
| # push: true | |
| # tags: ghcr.io/python-for-hpc/pyomp:latest |