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Investigate E2P2 #104

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GallVp opened this issue Nov 19, 2024 · 0 comments
Open

Investigate E2P2 #104

GallVp opened this issue Nov 19, 2024 · 0 comments
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enhancement New feature or request

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@GallVp
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GallVp commented Nov 19, 2024

Description of feature

https://github.com/carnegie/E2P2 - a potential tool for genepal pipeline? "The Ensemble Enzyme Prediction Pipeline (E2P2) annotates protein sequences with Enzyme Function classes comprised of full, four-part Enzyme Commission numbers and MetaCyc reaction identifiers. It is the enzyme annotation pipeline used to generate the species-specific metabolic databases at the Plant Metabolic Network since 2013. E2P2 systematically integrates results from two molecular function annotation algorithms using an ensemble classification scheme. For a given genome, all protein sequences are submitted as individual queries against the base-level annotation methods." - just wondering if this would do a better job than whats in emapper results? (for enzymes that is)

@GallVp GallVp added the enhancement New feature or request label Nov 19, 2024
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