Skip to content

Commit

Permalink
Version changed to 0.9.1 and doc regenerated
Browse files Browse the repository at this point in the history
  • Loading branch information
Sébastien Buchoux committed Mar 27, 2015
1 parent 03305b2 commit 1f1b48f
Show file tree
Hide file tree
Showing 240 changed files with 1,513 additions and 1,309 deletions.
2 changes: 1 addition & 1 deletion package/CHANGELOG
View file
Original file line number Diff line number Diff line change
Expand Up @@ -10,7 +10,7 @@ The rules for this file:
use tabs but use spaces for formatting

------------------------------------------------------------------------------
??/??/15 manuel.nuno.melo, richardjgowers
03/27/15 manuel.nuno.melo, richardjgowers
* 0.9.1

Enhancements
Expand Down
2 changes: 1 addition & 1 deletion package/MDAnalysis/__init__.py
View file
Original file line number Diff line number Diff line change
Expand Up @@ -153,7 +153,7 @@
394 (2009), 160--176, doi:10.1016/j.jmb.2009.09.009
"""

__version__ = "1.0.0-dev" # NOTE: keep in sync with RELEASE in setup.py
__version__ = "0.9.1" # NOTE: keep in sync with RELEASE in setup.py

__all__ = ['Timeseries', 'Universe', 'asUniverse', 'Writer', 'collection']

Expand Down
2 changes: 1 addition & 1 deletion package/doc/html/.buildinfo
View file
Original file line number Diff line number Diff line change
@@ -1,4 +1,4 @@
# Sphinx build info version 1
# This file hashes the configuration used when building these files. When it is not found, a full rebuild will be done.
config: 9941bf35a75d7bb7a2081ee26e9295dc
config: 456e6dfebaafb034b9acc5b020a9cdc3
tags: 645f666f9bcd5a90fca523b33c5a78b7
Binary file modified package/doc/html/.doctrees/documentation_pages/KDTree/KDTree.doctree
View file
Binary file not shown.
Binary file modified package/doc/html/.doctrees/documentation_pages/KDTree/NeighborSearch.doctree
View file
Binary file not shown.
Binary file modified package/doc/html/.doctrees/documentation_pages/KDTree_modules.doctree
View file
Binary file not shown.
Binary file modified package/doc/html/.doctrees/documentation_pages/analysis/align.doctree
View file
Binary file not shown.
Binary file modified package/doc/html/.doctrees/documentation_pages/analysis/contacts.doctree
View file
Binary file not shown.
Binary file modified package/doc/html/.doctrees/documentation_pages/analysis/density.doctree
View file
Binary file not shown.
Binary file modified package/doc/html/.doctrees/documentation_pages/analysis/distances.doctree
View file
Binary file not shown.
Binary file modified package/doc/html/.doctrees/documentation_pages/analysis/gnm.doctree
View file
Binary file not shown.
Binary file modified package/doc/html/.doctrees/documentation_pages/analysis/hbond_analysis.doctree
View file
Binary file not shown.
Binary file modified package/doc/html/.doctrees/documentation_pages/analysis/hbond_autocorrel.doctree
View file
Binary file not shown.
Binary file modified package/doc/html/.doctrees/documentation_pages/analysis/helanal.doctree
View file
Binary file not shown.
Binary file modified package/doc/html/.doctrees/documentation_pages/analysis/hole.doctree
View file
Binary file not shown.
Binary file modified package/doc/html/.doctrees/documentation_pages/analysis/leaflet.doctree
View file
Binary file not shown.
Binary file modified package/doc/html/.doctrees/documentation_pages/analysis/nuclinfo.doctree
View file
Binary file not shown.
Binary file modified package/doc/html/.doctrees/documentation_pages/analysis/rms.doctree
View file
Binary file not shown.
Binary file modified package/doc/html/.doctrees/documentation_pages/analysis/x3dna.doctree
View file
Binary file not shown.
Binary file modified package/doc/html/.doctrees/documentation_pages/analysis_modules.doctree
View file
Binary file not shown.
Binary file modified package/doc/html/.doctrees/documentation_pages/coordinates/CRD.doctree
View file
Binary file not shown.
Binary file modified package/doc/html/.doctrees/documentation_pages/coordinates/DCD.doctree
View file
Binary file not shown.
Binary file modified package/doc/html/.doctrees/documentation_pages/coordinates/DMS.doctree
View file
Binary file not shown.
Binary file modified package/doc/html/.doctrees/documentation_pages/coordinates/GRO.doctree
View file
Binary file not shown.
Binary file modified package/doc/html/.doctrees/documentation_pages/coordinates/LAMMPS.doctree
View file
Binary file not shown.
Binary file modified package/doc/html/.doctrees/documentation_pages/coordinates/PDB.doctree
View file
Binary file not shown.
Binary file modified package/doc/html/.doctrees/documentation_pages/coordinates/PDBQT.doctree
View file
Binary file not shown.
Binary file modified package/doc/html/.doctrees/documentation_pages/coordinates/PQR.doctree
View file
Binary file not shown.
Binary file modified package/doc/html/.doctrees/documentation_pages/coordinates/TRJ.doctree
View file
Binary file not shown.
Binary file modified package/doc/html/.doctrees/documentation_pages/coordinates/TRR.doctree
View file
Binary file not shown.
Binary file modified package/doc/html/.doctrees/documentation_pages/coordinates/TRZ.doctree
View file
Binary file not shown.
Binary file modified package/doc/html/.doctrees/documentation_pages/coordinates/XTC.doctree
View file
Binary file not shown.
Binary file modified package/doc/html/.doctrees/documentation_pages/coordinates/XYZ.doctree
View file
Binary file not shown.
Binary file modified package/doc/html/.doctrees/documentation_pages/coordinates/base.doctree
View file
Binary file not shown.
Binary file modified package/doc/html/.doctrees/documentation_pages/coordinates/core.doctree
View file
Binary file not shown.
Binary file modified package/doc/html/.doctrees/documentation_pages/coordinates/init.doctree
View file
Binary file not shown.
Binary file modified package/doc/html/.doctrees/documentation_pages/coordinates/pdbextensions.doctree
View file
Binary file not shown.
Binary file modified package/doc/html/.doctrees/documentation_pages/coordinates/xdrfile.doctree
View file
Binary file not shown.
Binary file modified package/doc/html/.doctrees/documentation_pages/coordinates/xdrfile/TRR.doctree
View file
Binary file not shown.
Binary file modified package/doc/html/.doctrees/documentation_pages/coordinates/xdrfile/XTC.doctree
View file
Binary file not shown.
Binary file modified package/doc/html/.doctrees/documentation_pages/coordinates/xdrfile/core.doctree
View file
Binary file not shown.
Binary file modified package/doc/html/.doctrees/documentation_pages/coordinates/xdrfile/libxdrfile2.doctree
View file
Binary file not shown.
Binary file modified package/doc/html/.doctrees/documentation_pages/coordinates/xdrfile/statno.doctree
View file
Binary file not shown.
Binary file modified package/doc/html/.doctrees/documentation_pages/coordinates_modules.doctree
View file
Binary file not shown.
Binary file modified package/doc/html/.doctrees/documentation_pages/core/AtomGroup.doctree
View file
Binary file not shown.
Binary file modified package/doc/html/.doctrees/documentation_pages/core/Selection.doctree
View file
Binary file not shown.
Binary file modified package/doc/html/.doctrees/documentation_pages/core/Timeseries.doctree
View file
Binary file not shown.
Binary file modified package/doc/html/.doctrees/documentation_pages/core/distances.doctree
View file
Binary file not shown.
Binary file modified package/doc/html/.doctrees/documentation_pages/core/init.doctree
View file
Binary file not shown.
Binary file modified package/doc/html/.doctrees/documentation_pages/core/log.doctree
View file
Binary file not shown.
Binary file modified package/doc/html/.doctrees/documentation_pages/core/parallel.doctree
View file
Binary file not shown.
Binary file modified package/doc/html/.doctrees/documentation_pages/core/qcprot.doctree
View file
Binary file not shown.
Binary file modified package/doc/html/.doctrees/documentation_pages/core/transformations.doctree
View file
Binary file not shown.
Binary file modified package/doc/html/.doctrees/documentation_pages/core/units.doctree
View file
Binary file not shown.
Binary file modified package/doc/html/.doctrees/documentation_pages/core/util.doctree
View file
Binary file not shown.
Binary file modified package/doc/html/.doctrees/documentation_pages/core_modules.doctree
View file
Binary file not shown.
Binary file modified package/doc/html/.doctrees/documentation_pages/overview.doctree
View file
Binary file not shown.
Binary file modified package/doc/html/.doctrees/documentation_pages/selections.doctree
View file
Binary file not shown.
Binary file modified package/doc/html/.doctrees/documentation_pages/selections/base.doctree
View file
Binary file not shown.
Binary file modified package/doc/html/.doctrees/documentation_pages/selections/charmm.doctree
View file
Binary file not shown.
Binary file modified package/doc/html/.doctrees/documentation_pages/selections/gromacs.doctree
View file
Binary file not shown.
Binary file modified package/doc/html/.doctrees/documentation_pages/selections/pymol.doctree
View file
Binary file not shown.
Binary file modified package/doc/html/.doctrees/documentation_pages/selections/vmd.doctree
View file
Binary file not shown.
Binary file modified package/doc/html/.doctrees/documentation_pages/selections_modules.doctree
View file
Binary file not shown.
Binary file modified package/doc/html/.doctrees/documentation_pages/topology/CRDParser.doctree
View file
Binary file not shown.
Binary file modified package/doc/html/.doctrees/documentation_pages/topology/DMSParser.doctree
View file
Binary file not shown.
Binary file modified package/doc/html/.doctrees/documentation_pages/topology/ExtendedPDBParser.doctree
View file
Binary file not shown.
Binary file modified package/doc/html/.doctrees/documentation_pages/topology/GROParser.doctree
View file
Binary file not shown.
Binary file modified package/doc/html/.doctrees/documentation_pages/topology/PDBParser.doctree
View file
Binary file not shown.
Binary file modified package/doc/html/.doctrees/documentation_pages/topology/PDBQTParser.doctree
View file
Binary file not shown.
Binary file modified package/doc/html/.doctrees/documentation_pages/topology/PQRParser.doctree
View file
Binary file not shown.
Binary file modified package/doc/html/.doctrees/documentation_pages/topology/PSFParser.doctree
View file
Binary file not shown.
Binary file modified package/doc/html/.doctrees/documentation_pages/topology/PrimitivePDBParser.doctree
View file
Binary file not shown.
Binary file modified package/doc/html/.doctrees/documentation_pages/topology/TOPParser.doctree
View file
Binary file not shown.
Binary file modified package/doc/html/.doctrees/documentation_pages/topology/TPRParser.doctree
View file
Binary file not shown.
Binary file modified package/doc/html/.doctrees/documentation_pages/topology/core.doctree
View file
Binary file not shown.
Binary file modified package/doc/html/.doctrees/documentation_pages/topology/init.doctree
View file
Binary file not shown.
Binary file modified package/doc/html/.doctrees/documentation_pages/topology/tables.doctree
View file
Binary file not shown.
Binary file modified package/doc/html/.doctrees/documentation_pages/topology_modules.doctree
View file
Binary file not shown.
Binary file modified package/doc/html/.doctrees/documentation_pages/visualization/streamlines.doctree
View file
Binary file not shown.
Binary file modified package/doc/html/.doctrees/documentation_pages/visualization/streamlines_3D.doctree
View file
Binary file not shown.
Binary file modified package/doc/html/.doctrees/documentation_pages/visualization_modules.doctree
View file
Binary file not shown.
Binary file modified package/doc/html/.doctrees/environment.pickle
View file
Binary file not shown.
Binary file modified package/doc/html/.doctrees/index.doctree
View file
Binary file not shown.
16 changes: 8 additions & 8 deletions package/doc/html/_modules/MDAnalysis.html
View file
Original file line number Diff line number Diff line change
Expand Up @@ -6,15 +6,15 @@
<head>
<meta http-equiv="Content-Type" content="text/html; charset=utf-8" />

<title>MDAnalysis &mdash; MDAnalysis 1.0.0-dev documentation</title>
<title>MDAnalysis &mdash; MDAnalysis 0.9.1 documentation</title>

<link rel="stylesheet" href="../_static/sphinxdoc.css" type="text/css" />
<link rel="stylesheet" href="../_static/pygments.css" type="text/css" />

<script type="text/javascript">
var DOCUMENTATION_OPTIONS = {
URL_ROOT: '../',
VERSION: '1.0.0-dev',
VERSION: '0.9.1',
COLLAPSE_INDEX: false,
FILE_SUFFIX: '.html',
HAS_SOURCE: true
Expand All @@ -25,10 +25,10 @@
<script type="text/javascript" src="../_static/doctools.js"></script>
<script type="text/javascript" src="https://cdn.mathjax.org/mathjax/latest/MathJax.js?config=TeX-AMS-MML_HTMLorMML"></script>
<link rel="search" type="application/opensearchdescription+xml"
title="Search within MDAnalysis 1.0.0-dev documentation"
title="Search within MDAnalysis 0.9.1 documentation"
href="../_static/opensearch.xml"/>
<link rel="shortcut icon" href="../_static/mdanalysis-logo.ico"/>
<link rel="top" title="MDAnalysis 1.0.0-dev documentation" href="../index.html" />
<link rel="top" title="MDAnalysis 0.9.1 documentation" href="../index.html" />
<link rel="up" title="Module code" href="index.html" />
</head>
<body>
Expand All @@ -41,7 +41,7 @@ <h3>Navigation</h3>
<li class="right" >
<a href="../py-modindex.html" title="Python Module Index"
>modules</a> |</li>
<li><a href="../index.html">MDAnalysis 1.0.0-dev documentation</a> &raquo;</li>
<li><a href="../index.html">MDAnalysis 0.9.1 documentation</a> &raquo;</li>
<li><a href="index.html" accesskey="U">Module code</a> &raquo;</li>
</ul>
</div>
Expand Down Expand Up @@ -227,7 +227,7 @@ <h1>Source code for MDAnalysis</h1><div class="highlight"><pre>
<span class="sd"> 394 (2009), 160--176, doi:10.1016/j.jmb.2009.09.009</span>
<span class="sd">&quot;&quot;&quot;</span>

<span class="n">__version__</span> <span class="o">=</span> <span class="s">&quot;1.0.0-dev&quot;</span> <span class="c"># NOTE: keep in sync with RELEASE in setup.py</span>
<span class="n">__version__</span> <span class="o">=</span> <span class="s">&quot;0.9.1&quot;</span> <span class="c"># NOTE: keep in sync with RELEASE in setup.py</span>

<span class="n">__all__</span> <span class="o">=</span> <span class="p">[</span><span class="s">&#39;Timeseries&#39;</span><span class="p">,</span> <span class="s">&#39;Universe&#39;</span><span class="p">,</span> <span class="s">&#39;asUniverse&#39;</span><span class="p">,</span> <span class="s">&#39;Writer&#39;</span><span class="p">,</span> <span class="s">&#39;collection&#39;</span><span class="p">]</span>

Expand Down Expand Up @@ -340,7 +340,7 @@ <h3>Navigation</h3>
<li class="right" >
<a href="../py-modindex.html" title="Python Module Index"
>modules</a> |</li>
<li><a href="../index.html">MDAnalysis 1.0.0-dev documentation</a> &raquo;</li>
<li><a href="../index.html">MDAnalysis 0.9.1 documentation</a> &raquo;</li>
<li><a href="index.html" >Module code</a> &raquo;</li>
</ul>
</div>
Expand All @@ -352,7 +352,7 @@ <h3>Navigation</h3>
Benjamin Hall, Joe Jordan, Jinju Lu, Robert McGibbon,
Manuel Nuno Melo, Danny Parton, Joshua L. Phillips, Tyler Reddy, Paul Rigor, Andy Somogyi,
Lukas Stelzl, Zhuyi Xue, and Oliver Beckstein.
Created using <a href="http://sphinx-doc.org/">Sphinx</a> 1.2.3.
Created using <a href="http://sphinx-doc.org/">Sphinx</a> 1.2.
</div>
</body>
</html>
14 changes: 7 additions & 7 deletions package/doc/html/_modules/MDAnalysis/KDTree/KDTree.html
View file
Original file line number Diff line number Diff line change
Expand Up @@ -6,15 +6,15 @@
<head>
<meta http-equiv="Content-Type" content="text/html; charset=utf-8" />

<title>MDAnalysis.KDTree.KDTree &mdash; MDAnalysis 1.0.0-dev documentation</title>
<title>MDAnalysis.KDTree.KDTree &mdash; MDAnalysis 0.9.1 documentation</title>

<link rel="stylesheet" href="../../../_static/sphinxdoc.css" type="text/css" />
<link rel="stylesheet" href="../../../_static/pygments.css" type="text/css" />

<script type="text/javascript">
var DOCUMENTATION_OPTIONS = {
URL_ROOT: '../../../',
VERSION: '1.0.0-dev',
VERSION: '0.9.1',
COLLAPSE_INDEX: false,
FILE_SUFFIX: '.html',
HAS_SOURCE: true
Expand All @@ -25,10 +25,10 @@
<script type="text/javascript" src="../../../_static/doctools.js"></script>
<script type="text/javascript" src="https://cdn.mathjax.org/mathjax/latest/MathJax.js?config=TeX-AMS-MML_HTMLorMML"></script>
<link rel="search" type="application/opensearchdescription+xml"
title="Search within MDAnalysis 1.0.0-dev documentation"
title="Search within MDAnalysis 0.9.1 documentation"
href="../../../_static/opensearch.xml"/>
<link rel="shortcut icon" href="../../../_static/mdanalysis-logo.ico"/>
<link rel="top" title="MDAnalysis 1.0.0-dev documentation" href="../../../index.html" />
<link rel="top" title="MDAnalysis 0.9.1 documentation" href="../../../index.html" />
<link rel="up" title="MDAnalysis" href="../../MDAnalysis.html" />
</head>
<body>
Expand All @@ -41,7 +41,7 @@ <h3>Navigation</h3>
<li class="right" >
<a href="../../../py-modindex.html" title="Python Module Index"
>modules</a> |</li>
<li><a href="../../../index.html">MDAnalysis 1.0.0-dev documentation</a> &raquo;</li>
<li><a href="../../../index.html">MDAnalysis 0.9.1 documentation</a> &raquo;</li>
<li><a href="../../index.html" >Module code</a> &raquo;</li>
<li><a href="../../MDAnalysis.html" accesskey="U">MDAnalysis</a> &raquo;</li>
</ul>
Expand Down Expand Up @@ -421,7 +421,7 @@ <h3>Navigation</h3>
<li class="right" >
<a href="../../../py-modindex.html" title="Python Module Index"
>modules</a> |</li>
<li><a href="../../../index.html">MDAnalysis 1.0.0-dev documentation</a> &raquo;</li>
<li><a href="../../../index.html">MDAnalysis 0.9.1 documentation</a> &raquo;</li>
<li><a href="../../index.html" >Module code</a> &raquo;</li>
<li><a href="../../MDAnalysis.html" >MDAnalysis</a> &raquo;</li>
</ul>
Expand All @@ -434,7 +434,7 @@ <h3>Navigation</h3>
Benjamin Hall, Joe Jordan, Jinju Lu, Robert McGibbon,
Manuel Nuno Melo, Danny Parton, Joshua L. Phillips, Tyler Reddy, Paul Rigor, Andy Somogyi,
Lukas Stelzl, Zhuyi Xue, and Oliver Beckstein.
Created using <a href="http://sphinx-doc.org/">Sphinx</a> 1.2.3.
Created using <a href="http://sphinx-doc.org/">Sphinx</a> 1.2.
</div>
</body>
</html>
14 changes: 7 additions & 7 deletions package/doc/html/_modules/MDAnalysis/KDTree/NeighborSearch.html
View file
Original file line number Diff line number Diff line change
Expand Up @@ -6,15 +6,15 @@
<head>
<meta http-equiv="Content-Type" content="text/html; charset=utf-8" />

<title>MDAnalysis.KDTree.NeighborSearch &mdash; MDAnalysis 1.0.0-dev documentation</title>
<title>MDAnalysis.KDTree.NeighborSearch &mdash; MDAnalysis 0.9.1 documentation</title>

<link rel="stylesheet" href="../../../_static/sphinxdoc.css" type="text/css" />
<link rel="stylesheet" href="../../../_static/pygments.css" type="text/css" />

<script type="text/javascript">
var DOCUMENTATION_OPTIONS = {
URL_ROOT: '../../../',
VERSION: '1.0.0-dev',
VERSION: '0.9.1',
COLLAPSE_INDEX: false,
FILE_SUFFIX: '.html',
HAS_SOURCE: true
Expand All @@ -25,10 +25,10 @@
<script type="text/javascript" src="../../../_static/doctools.js"></script>
<script type="text/javascript" src="https://cdn.mathjax.org/mathjax/latest/MathJax.js?config=TeX-AMS-MML_HTMLorMML"></script>
<link rel="search" type="application/opensearchdescription+xml"
title="Search within MDAnalysis 1.0.0-dev documentation"
title="Search within MDAnalysis 0.9.1 documentation"
href="../../../_static/opensearch.xml"/>
<link rel="shortcut icon" href="../../../_static/mdanalysis-logo.ico"/>
<link rel="top" title="MDAnalysis 1.0.0-dev documentation" href="../../../index.html" />
<link rel="top" title="MDAnalysis 0.9.1 documentation" href="../../../index.html" />
<link rel="up" title="MDAnalysis" href="../../MDAnalysis.html" />
</head>
<body>
Expand All @@ -41,7 +41,7 @@ <h3>Navigation</h3>
<li class="right" >
<a href="../../../py-modindex.html" title="Python Module Index"
>modules</a> |</li>
<li><a href="../../../index.html">MDAnalysis 1.0.0-dev documentation</a> &raquo;</li>
<li><a href="../../../index.html">MDAnalysis 0.9.1 documentation</a> &raquo;</li>
<li><a href="../../index.html" >Module code</a> &raquo;</li>
<li><a href="../../MDAnalysis.html" accesskey="U">MDAnalysis</a> &raquo;</li>
</ul>
Expand Down Expand Up @@ -428,7 +428,7 @@ <h3>Navigation</h3>
<li class="right" >
<a href="../../../py-modindex.html" title="Python Module Index"
>modules</a> |</li>
<li><a href="../../../index.html">MDAnalysis 1.0.0-dev documentation</a> &raquo;</li>
<li><a href="../../../index.html">MDAnalysis 0.9.1 documentation</a> &raquo;</li>
<li><a href="../../index.html" >Module code</a> &raquo;</li>
<li><a href="../../MDAnalysis.html" >MDAnalysis</a> &raquo;</li>
</ul>
Expand All @@ -441,7 +441,7 @@ <h3>Navigation</h3>
Benjamin Hall, Joe Jordan, Jinju Lu, Robert McGibbon,
Manuel Nuno Melo, Danny Parton, Joshua L. Phillips, Tyler Reddy, Paul Rigor, Andy Somogyi,
Lukas Stelzl, Zhuyi Xue, and Oliver Beckstein.
Created using <a href="http://sphinx-doc.org/">Sphinx</a> 1.2.3.
Created using <a href="http://sphinx-doc.org/">Sphinx</a> 1.2.
</div>
</body>
</html>
14 changes: 7 additions & 7 deletions package/doc/html/_modules/MDAnalysis/analysis/align.html
View file
Original file line number Diff line number Diff line change
Expand Up @@ -6,15 +6,15 @@
<head>
<meta http-equiv="Content-Type" content="text/html; charset=utf-8" />

<title>MDAnalysis.analysis.align &mdash; MDAnalysis 1.0.0-dev documentation</title>
<title>MDAnalysis.analysis.align &mdash; MDAnalysis 0.9.1 documentation</title>

<link rel="stylesheet" href="../../../_static/sphinxdoc.css" type="text/css" />
<link rel="stylesheet" href="../../../_static/pygments.css" type="text/css" />

<script type="text/javascript">
var DOCUMENTATION_OPTIONS = {
URL_ROOT: '../../../',
VERSION: '1.0.0-dev',
VERSION: '0.9.1',
COLLAPSE_INDEX: false,
FILE_SUFFIX: '.html',
HAS_SOURCE: true
Expand All @@ -25,10 +25,10 @@
<script type="text/javascript" src="../../../_static/doctools.js"></script>
<script type="text/javascript" src="https://cdn.mathjax.org/mathjax/latest/MathJax.js?config=TeX-AMS-MML_HTMLorMML"></script>
<link rel="search" type="application/opensearchdescription+xml"
title="Search within MDAnalysis 1.0.0-dev documentation"
title="Search within MDAnalysis 0.9.1 documentation"
href="../../../_static/opensearch.xml"/>
<link rel="shortcut icon" href="../../../_static/mdanalysis-logo.ico"/>
<link rel="top" title="MDAnalysis 1.0.0-dev documentation" href="../../../index.html" />
<link rel="top" title="MDAnalysis 0.9.1 documentation" href="../../../index.html" />
<link rel="up" title="MDAnalysis" href="../../MDAnalysis.html" />
</head>
<body>
Expand All @@ -41,7 +41,7 @@ <h3>Navigation</h3>
<li class="right" >
<a href="../../../py-modindex.html" title="Python Module Index"
>modules</a> |</li>
<li><a href="../../../index.html">MDAnalysis 1.0.0-dev documentation</a> &raquo;</li>
<li><a href="../../../index.html">MDAnalysis 0.9.1 documentation</a> &raquo;</li>
<li><a href="../../index.html" >Module code</a> &raquo;</li>
<li><a href="../../MDAnalysis.html" accesskey="U">MDAnalysis</a> &raquo;</li>
</ul>
Expand Down Expand Up @@ -825,7 +825,7 @@ <h3>Navigation</h3>
<li class="right" >
<a href="../../../py-modindex.html" title="Python Module Index"
>modules</a> |</li>
<li><a href="../../../index.html">MDAnalysis 1.0.0-dev documentation</a> &raquo;</li>
<li><a href="../../../index.html">MDAnalysis 0.9.1 documentation</a> &raquo;</li>
<li><a href="../../index.html" >Module code</a> &raquo;</li>
<li><a href="../../MDAnalysis.html" >MDAnalysis</a> &raquo;</li>
</ul>
Expand All @@ -838,7 +838,7 @@ <h3>Navigation</h3>
Benjamin Hall, Joe Jordan, Jinju Lu, Robert McGibbon,
Manuel Nuno Melo, Danny Parton, Joshua L. Phillips, Tyler Reddy, Paul Rigor, Andy Somogyi,
Lukas Stelzl, Zhuyi Xue, and Oliver Beckstein.
Created using <a href="http://sphinx-doc.org/">Sphinx</a> 1.2.3.
Created using <a href="http://sphinx-doc.org/">Sphinx</a> 1.2.
</div>
</body>
</html>
14 changes: 7 additions & 7 deletions package/doc/html/_modules/MDAnalysis/analysis/contacts.html
View file
Original file line number Diff line number Diff line change
Expand Up @@ -6,15 +6,15 @@
<head>
<meta http-equiv="Content-Type" content="text/html; charset=utf-8" />

<title>MDAnalysis.analysis.contacts &mdash; MDAnalysis 1.0.0-dev documentation</title>
<title>MDAnalysis.analysis.contacts &mdash; MDAnalysis 0.9.1 documentation</title>

<link rel="stylesheet" href="../../../_static/sphinxdoc.css" type="text/css" />
<link rel="stylesheet" href="../../../_static/pygments.css" type="text/css" />

<script type="text/javascript">
var DOCUMENTATION_OPTIONS = {
URL_ROOT: '../../../',
VERSION: '1.0.0-dev',
VERSION: '0.9.1',
COLLAPSE_INDEX: false,
FILE_SUFFIX: '.html',
HAS_SOURCE: true
Expand All @@ -25,10 +25,10 @@
<script type="text/javascript" src="../../../_static/doctools.js"></script>
<script type="text/javascript" src="https://cdn.mathjax.org/mathjax/latest/MathJax.js?config=TeX-AMS-MML_HTMLorMML"></script>
<link rel="search" type="application/opensearchdescription+xml"
title="Search within MDAnalysis 1.0.0-dev documentation"
title="Search within MDAnalysis 0.9.1 documentation"
href="../../../_static/opensearch.xml"/>
<link rel="shortcut icon" href="../../../_static/mdanalysis-logo.ico"/>
<link rel="top" title="MDAnalysis 1.0.0-dev documentation" href="../../../index.html" />
<link rel="top" title="MDAnalysis 0.9.1 documentation" href="../../../index.html" />
<link rel="up" title="MDAnalysis" href="../../MDAnalysis.html" />
</head>
<body>
Expand All @@ -41,7 +41,7 @@ <h3>Navigation</h3>
<li class="right" >
<a href="../../../py-modindex.html" title="Python Module Index"
>modules</a> |</li>
<li><a href="../../../index.html">MDAnalysis 1.0.0-dev documentation</a> &raquo;</li>
<li><a href="../../../index.html">MDAnalysis 0.9.1 documentation</a> &raquo;</li>
<li><a href="../../index.html" >Module code</a> &raquo;</li>
<li><a href="../../MDAnalysis.html" accesskey="U">MDAnalysis</a> &raquo;</li>
</ul>
Expand Down Expand Up @@ -859,7 +859,7 @@ <h3>Navigation</h3>
<li class="right" >
<a href="../../../py-modindex.html" title="Python Module Index"
>modules</a> |</li>
<li><a href="../../../index.html">MDAnalysis 1.0.0-dev documentation</a> &raquo;</li>
<li><a href="../../../index.html">MDAnalysis 0.9.1 documentation</a> &raquo;</li>
<li><a href="../../index.html" >Module code</a> &raquo;</li>
<li><a href="../../MDAnalysis.html" >MDAnalysis</a> &raquo;</li>
</ul>
Expand All @@ -872,7 +872,7 @@ <h3>Navigation</h3>
Benjamin Hall, Joe Jordan, Jinju Lu, Robert McGibbon,
Manuel Nuno Melo, Danny Parton, Joshua L. Phillips, Tyler Reddy, Paul Rigor, Andy Somogyi,
Lukas Stelzl, Zhuyi Xue, and Oliver Beckstein.
Created using <a href="http://sphinx-doc.org/">Sphinx</a> 1.2.3.
Created using <a href="http://sphinx-doc.org/">Sphinx</a> 1.2.
</div>
</body>
</html>
14 changes: 7 additions & 7 deletions package/doc/html/_modules/MDAnalysis/analysis/density.html
View file
Original file line number Diff line number Diff line change
Expand Up @@ -6,15 +6,15 @@
<head>
<meta http-equiv="Content-Type" content="text/html; charset=utf-8" />

<title>MDAnalysis.analysis.density &mdash; MDAnalysis 1.0.0-dev documentation</title>
<title>MDAnalysis.analysis.density &mdash; MDAnalysis 0.9.1 documentation</title>

<link rel="stylesheet" href="../../../_static/sphinxdoc.css" type="text/css" />
<link rel="stylesheet" href="../../../_static/pygments.css" type="text/css" />

<script type="text/javascript">
var DOCUMENTATION_OPTIONS = {
URL_ROOT: '../../../',
VERSION: '1.0.0-dev',
VERSION: '0.9.1',
COLLAPSE_INDEX: false,
FILE_SUFFIX: '.html',
HAS_SOURCE: true
Expand All @@ -25,10 +25,10 @@
<script type="text/javascript" src="../../../_static/doctools.js"></script>
<script type="text/javascript" src="https://cdn.mathjax.org/mathjax/latest/MathJax.js?config=TeX-AMS-MML_HTMLorMML"></script>
<link rel="search" type="application/opensearchdescription+xml"
title="Search within MDAnalysis 1.0.0-dev documentation"
title="Search within MDAnalysis 0.9.1 documentation"
href="../../../_static/opensearch.xml"/>
<link rel="shortcut icon" href="../../../_static/mdanalysis-logo.ico"/>
<link rel="top" title="MDAnalysis 1.0.0-dev documentation" href="../../../index.html" />
<link rel="top" title="MDAnalysis 0.9.1 documentation" href="../../../index.html" />
<link rel="up" title="MDAnalysis" href="../../MDAnalysis.html" />
</head>
<body>
Expand All @@ -41,7 +41,7 @@ <h3>Navigation</h3>
<li class="right" >
<a href="../../../py-modindex.html" title="Python Module Index"
>modules</a> |</li>
<li><a href="../../../index.html">MDAnalysis 1.0.0-dev documentation</a> &raquo;</li>
<li><a href="../../../index.html">MDAnalysis 0.9.1 documentation</a> &raquo;</li>
<li><a href="../../index.html" >Module code</a> &raquo;</li>
<li><a href="../../MDAnalysis.html" accesskey="U">MDAnalysis</a> &raquo;</li>
</ul>
Expand Down Expand Up @@ -938,7 +938,7 @@ <h3>Navigation</h3>
<li class="right" >
<a href="../../../py-modindex.html" title="Python Module Index"
>modules</a> |</li>
<li><a href="../../../index.html">MDAnalysis 1.0.0-dev documentation</a> &raquo;</li>
<li><a href="../../../index.html">MDAnalysis 0.9.1 documentation</a> &raquo;</li>
<li><a href="../../index.html" >Module code</a> &raquo;</li>
<li><a href="../../MDAnalysis.html" >MDAnalysis</a> &raquo;</li>
</ul>
Expand All @@ -951,7 +951,7 @@ <h3>Navigation</h3>
Benjamin Hall, Joe Jordan, Jinju Lu, Robert McGibbon,
Manuel Nuno Melo, Danny Parton, Joshua L. Phillips, Tyler Reddy, Paul Rigor, Andy Somogyi,
Lukas Stelzl, Zhuyi Xue, and Oliver Beckstein.
Created using <a href="http://sphinx-doc.org/">Sphinx</a> 1.2.3.
Created using <a href="http://sphinx-doc.org/">Sphinx</a> 1.2.
</div>
</body>
</html>
Loading

0 comments on commit 1f1b48f

Please sign in to comment.