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Check usage of 'GO:0048046 apoplast' in curated sessions #98

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CuzickA opened this issue Dec 10, 2021 · 4 comments
Closed

Check usage of 'GO:0048046 apoplast' in curated sessions #98

CuzickA opened this issue Dec 10, 2021 · 4 comments
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@CuzickA
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CuzickA commented Dec 10, 2021

It may need updating to 'GO:0140593 host apoplast' in cases where the pathogen gene product is functioning within host apoplast, rather than a host gene product functioning within apoplast.

https://www.ebi.ac.uk/QuickGO/term/GO:0140593
https://www.ebi.ac.uk/QuickGO/term/GO:0048046

@jseager7 please could you pull out any sessions annotated with 'GO:0048046 apoplast'

@jseager7 jseager7 self-assigned this Dec 13, 2021
@jseager7
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@CuzickA I'll have to make a new export before I can check this because the current one is pretty outdated.

@jseager7
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jseager7 commented Dec 14, 2021

@CuzickA Sorry about the delay. Here's the list of publications.

You can use the checkbox next to each PMID to track which ones you've reviewed, if you like.

Note that I searched for any session where 'apoplast' (GO:0048046) was annotated as a primary term or an extension.

@CuzickA
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CuzickA commented Dec 14, 2021

Thanks @jseager7

@CuzickA
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CuzickA commented Dec 15, 2021

All now checked and changed, closing ticket

@CuzickA CuzickA closed this as completed Dec 15, 2021
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