feat(api, robot-server): Plate Reader CSV output functionality #1930
Workflow file for this run
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| name: Analyses Snapshot Test | |
| on: | |
| workflow_dispatch: | |
| inputs: | |
| ANALYSIS_REF: | |
| description: 'Branch or tag that provides the analysis output at test runtime' | |
| required: true | |
| default: 'edge' | |
| SNAPSHOT_REF: | |
| description: 'Branch or tag that provides the snapshot and test code at test runtime' | |
| required: true | |
| default: 'edge' | |
| OPEN_PR_ON_FAILURE: | |
| description: 'If the test fails, open a PR to update the snapshots' | |
| type: boolean | |
| required: true | |
| default: false | |
| schedule: | |
| - cron: '26 7 * * *' # 7:26 AM UTC | |
| pull_request: | |
| paths: | |
| - 'api/**' | |
| - '!api/tests/**' | |
| - '!api/docs/**' | |
| - '!api/release-notes-internal.md' | |
| - '!api/release-notes.md' | |
| - 'shared-data/**/*' | |
| - '!shared-data/js/**' | |
| - '.github/workflows/analyses-snapshot-test.yaml' | |
| - 'analyses-snapshot-testing/**' | |
| types: | |
| - opened #default | |
| - synchronize #default | |
| - reopened #default | |
| - labeled | |
| concurrency: | |
| group: ${{ github.workflow }}-${{ github.event.pull_request.number || github.ref }} | |
| cancel-in-progress: true | |
| jobs: | |
| build-and-test: | |
| timeout-minutes: 15 | |
| runs-on: ubuntu-latest | |
| env: | |
| ANALYSIS_REF: ${{ github.event.inputs.ANALYSIS_REF || github.head_ref || 'edge' }} | |
| SNAPSHOT_REF: ${{ github.event.inputs.SNAPSHOT_REF || github.head_ref || 'edge' }} | |
| # If we're running because of workflow_dispatch, use the user input to decide | |
| # whether to open a PR on failure. Otherwise, there is no user input, | |
| # so we only open a PR if the PR has the label 'gen-analyses-snapshot-pr' | |
| OPEN_PR_ON_FAILURE: ${{ (github.event_name == 'workflow_dispatch' && github.events.inputs.OPEN_PR_ON_FAILURE) || ((github.event_name != 'workflow_dispatch') && (contains(github.event.pull_request.labels.*.name, 'gen-analyses-snapshot-pr'))) }} | |
| PR_TARGET_BRANCH: ${{ github.event.pull_request.base.ref || 'not a pr'}} | |
| steps: | |
| - name: Checkout Repository | |
| uses: actions/checkout@v4 | |
| with: | |
| ref: ${{ env.SNAPSHOT_REF }} | |
| - name: Are the analyses snapshots in my PR branch in sync with the target branch? | |
| if: github.event_name == 'pull_request' | |
| run: | | |
| git fetch origin ${{ env.PR_TARGET_BRANCH }} | |
| DIFF_OUTPUT=$(git diff HEAD origin/${{ env.PR_TARGET_BRANCH }} -- analyses-snapshot-testing/tests/__snapshots__/analyses_snapshot_test) | |
| if [ -n "$DIFF_OUTPUT" ]; then | |
| echo "Analyses snapshots do NOT match ${{ env.PR_TARGET_BRANCH }} snapshots." | |
| echo "Is this becasue you have not pulled and merged ${{ env.PR_TARGET_BRANCH }}?" | |
| echo "Or is this because you have already updated your snapshots and are all good 😊?" | |
| else | |
| echo "Analyses snapshots match ${{ env.PR_TARGET_BRANCH }} snapshots." | |
| fi | |
| - name: Docker Build | |
| working-directory: analyses-snapshot-testing | |
| run: make build-opentrons-analysis | |
| - name: Set up Python 3.13 | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: '3.13.0' | |
| cache: 'pipenv' | |
| cache-dependency-path: analyses-snapshot-testing/Pipfile.lock | |
| - name: Setup Python Dependencies | |
| working-directory: analyses-snapshot-testing | |
| run: make setup | |
| - name: Run Test | |
| id: run_test | |
| working-directory: analyses-snapshot-testing | |
| run: make snapshot-test | |
| - name: Upload Report | |
| if: '!cancelled()' | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| name: test-report | |
| path: analyses-snapshot-testing/results/ | |
| - name: Handle Test Failure | |
| id: handle_failure | |
| if: always() && steps.run_test.outcome == 'failure' && (env.OPEN_PR_ON_FAILURE == 'true' || github.event_name == 'schedule') | |
| working-directory: analyses-snapshot-testing | |
| run: make snapshot-test-update | |
| - name: Create Snapshot update Request | |
| id: create_pull_request | |
| if: always() && steps.handle_failure.outcome == 'success' && env.OPEN_PR_ON_FAILURE == 'true' && github.event_name == 'pull_request' | |
| uses: peter-evans/create-pull-request@v7 | |
| with: | |
| commit-message: 'fix(analyses-snapshot-testing): heal analyses snapshots' | |
| title: 'fix(analyses-snapshot-testing): heal ${{ env.ANALYSIS_REF }} snapshots' | |
| body: 'This PR was requested on the PR https://github.com/${{ github.repository }}/pull/${{ github.event.pull_request.number }}' | |
| branch: 'analyses-snapshot-testing/${{ env.ANALYSIS_REF }}-from-${{ env.SNAPSHOT_REF}}' | |
| base: ${{ env.SNAPSHOT_REF}} | |
| - name: Comment on feature PR | |
| if: always() && steps.create_pull_request.outcome == 'success' && github.event_name == 'pull_request' | |
| uses: actions/github-script@v7 | |
| with: | |
| script: | | |
| const message = 'A PR has been opened to address analyses snapshot changes. Please review the changes here: https://github.com/${{ github.repository }}/pull/${{ steps.create_pull_request.outputs.pull-request-number }}'; | |
| github.rest.issues.createComment({ | |
| owner: context.repo.owner, | |
| repo: context.repo.repo, | |
| issue_number: context.issue.number, | |
| body: message | |
| }); | |
| - name: Create Snapshot update Request on edge overnight failure | |
| if: always() && steps.handle_failure.outcome == 'success' && github.event_name == 'schedule' | |
| uses: peter-evans/create-pull-request@v7 | |
| with: # scheduled run uses the default values for ANALYSIS_REF and SNAPSHOT_REF which are edge | |
| commit-message: 'fix(analyses-snapshot-testing): heal ${{ env.ANALYSIS_REF }} snapshots' | |
| title: 'fix(analyses-snapshot-testing): heal ${{ env.ANALYSIS_REF }} snapshots' | |
| body: 'The ${{ env.ANALYSIS_REF }} overnight analyses snapshot test is failing. This PR was opened to alert us to the failure.' | |
| branch: 'analyses-snapshot-testing/${{ env.ANALYSIS_REF }}-from-${{ env.SNAPSHOT_REF}}' | |
| base: ${{ env.SNAPSHOT_REF}} |