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Releases: OpenSMFS/PyBroMo

Version 0.8.1

25 Jun 11:19
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Changes:

  • Add support for Gaussian PSF (see #2).
  • Rename function hash_ to hashfunc to remove conflicts with variables names hash_ in the code.
    For user code, add a compatibility function hash_ that raises a FutureWarning.
  • Fix previously ignored chunkslice argument. This argument is either 'time' or 'bytes' and determines
    if chunksize refers to the number of elements or bytes.
  • Code and docstrings cleanups.

This release was sponsored by Dr. Eitan Lerner of the Department of Biological Chemistry, in the Alexander Silberman Institute of Life Sciences, The Hebrew University of Jerusalem.

Version 0.8

05 Jun 23:00
f047fd8
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Main changes in this version:

  • adds the option to save the particle's position for each emitted photon (timestamp).
  • new section in the smFRET simulation notebook shows how to plot the PSF with an overlay of photon emission distribution.
  • significantly improved docstrings and code cleanups
  • refactor and few API additions, added an constructor Particles.from_specs() to more easily create multiple popualtions (see notebook 1 for an example).

This release was sponsored by Dr. Eitan Lerner of the Department of Biological Chemistry, in the Alexander Silberman Institute of Life Sciences, The Hebrew University of Jerusalem.