GenomicsDB directory should not exist

OpenOmics · Jun 21, 2024 · 463aef1 · 463aef1
1 parent ce3085f
commit 463aef1
Showing 1 changed file with 0 additions and 1 deletion.
diff --git a/workflow/rules/gatk_germline.smk b/workflow/rules/gatk_germline.smk
@@ -233,7 +233,6 @@ rule gatk_germline_genomicsdbimport:
     # to a non-existent or empty directory.
     if [ -d "{params.gdb}" ]; then
         rm -rf "{params.gdb}";
-        mkdir -p "{params.gdb}";
     fi
 
     # Import gVCFs into a TileDB GenomicsDB