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Contexts #9

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Contexts #9

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3fa68fe
Update for new computation environment routines.
chrispbradley Apr 10, 2018
fed4da1
Merge branch 'develop' of https://github.com/OpenCMISS-Examples/diffu…
chrispbradley Apr 11, 2018
c2180c3
Fixes for contexts.
chrispbradley Apr 27, 2018
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36 changes: 21 additions & 15 deletions src/fortran/diffusion_equation.F90
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Original file line number Diff line number Diff line change
@@ -1,4 +1,4 @@
PROGRAM DIFFUSION_EQUATION
PROGRAM DiffusionEquation

USE OpenCMISS
USE OpenCMISS_Iron
Expand Down Expand Up @@ -54,7 +54,9 @@ PROGRAM DIFFUSION_EQUATION

!CMISS variables
TYPE(cmfe_BasisType) :: Basis
TYPE(cmfe_CoordinateSystemType) :: CoordinateSystem,WorldCoordinateSystem
TYPE(cmfe_ComputationEnvironmentType) :: computationEnvironment
TYPE(cmfe_ContextType) :: context
TYPE(cmfe_CoordinateSystemType) :: CoordinateSystem
TYPE(cmfe_DecompositionType) :: Decomposition
TYPE(cmfe_EquationsType) :: Equations
TYPE(cmfe_EquationsSetType) :: EquationsSet
Expand Down Expand Up @@ -94,13 +96,17 @@ PROGRAM DIFFUSION_EQUATION
#endif

!Intialise OpenCMISS
CALL cmfe_Initialise(WorldCoordinateSystem,WorldRegion,Err)

CALL cmfe_ErrorHandlingModeSet(CMFE_ERRORS_TRAP_ERROR,Err)
CALL cmfe_Context_Initialise(context,err)
CALL cmfe_Initialise(context,err)
CALL cmfe_ErrorHandlingModeSet(CMFE_ERRORS_TRAP_ERROR,err)
CALL cmfe_Region_Initialise(worldRegion,err)
CALL cmfe_Context_WorldRegionGet(context,worldRegion,err)

!Get the computational nodes information
CALL cmfe_ComputationalNumberOfNodesGet(NumberOfComputationalNodes,Err)
CALL cmfe_ComputationalNodeNumberGet(ComputationalNodeNumber,Err)
CALL cmfe_ComputationEnvironment_Initialise(computationEnvironment,err)
CALL cmfe_Context_ComputationEnvironmentGet(context,computationEnvironment,err)
CALL cmfe_ComputationEnvironment_NumberOfWorldNodesGet(computationEnvironment,numberOfComputationalNodes,err)
CALL cmfe_ComputationEnvironment_WorldNodeNumberGet(computationEnvironment,computationalNodeNumber,err)

NUMBER_GLOBAL_X_ELEMENTS=10
NUMBER_GLOBAL_Y_ELEMENTS=10
Expand All @@ -119,7 +125,7 @@ PROGRAM DIFFUSION_EQUATION

!Start the creation of a new RC coordinate system
CALL cmfe_CoordinateSystem_Initialise(CoordinateSystem,Err)
CALL cmfe_CoordinateSystem_CreateStart(CoordinateSystemUserNumber,CoordinateSystem,Err)
CALL cmfe_CoordinateSystem_CreateStart(CoordinateSystemUserNumber,context,CoordinateSystem,Err)
IF(NUMBER_GLOBAL_Z_ELEMENTS==0) THEN
!Set the coordinate system to be 2D
CALL cmfe_CoordinateSystem_DimensionSet(CoordinateSystem,2,Err)
Expand Down Expand Up @@ -149,7 +155,7 @@ PROGRAM DIFFUSION_EQUATION

!Start the creation of a basis (default is trilinear lagrange)
CALL cmfe_Basis_Initialise(Basis,Err)
CALL cmfe_Basis_CreateStart(BasisUserNumber,Basis,Err)
CALL cmfe_Basis_CreateStart(BasisUserNumber,context,Basis,Err)
IF(NUMBER_GLOBAL_Z_ELEMENTS==0) THEN
!Set the basis to be a bilinear Lagrange basis
!CALL cmfe_Basis_TypeSet(Basis,CMFE_BASIS_LAGRANGE_HERMITE_TP_TYPE,Err)
Expand Down Expand Up @@ -263,7 +269,8 @@ PROGRAM DIFFUSION_EQUATION
!Create the equations set analytic field variables
CALL cmfe_Field_Initialise(AnalyticField,Err)
IF(NUMBER_GLOBAL_Z_ELEMENTS==0) THEN
CALL cmfe_EquationsSet_AnalyticCreateStart(EquationsSet,CMFE_EQUATIONS_SET_DIFFUSION_EQUATION_TWO_DIM_1, &
CALL cmfe_EquationsSet_AnalyticCreateStart(EquationsSet, &
& CMFE_EQUATIONS_SET_DIFFUSION_EQUATION_TWO_DIM_1, &
& AnalyticFieldUserNumber, &
& AnalyticField,Err)
ELSE
Expand Down Expand Up @@ -335,8 +342,8 @@ PROGRAM DIFFUSION_EQUATION

!Create the problem
CALL cmfe_Problem_Initialise(Problem,Err)
CALL cmfe_Problem_CreateStart(ProblemUserNumber,[CMFE_PROBLEM_CLASSICAL_FIELD_CLASS,CMFE_PROBLEM_DIFFUSION_EQUATION_TYPE, &
& CMFE_PROBLEM_NO_SOURCE_DIFFUSION_SUBTYPE],Problem,Err)
CALL cmfe_Problem_CreateStart(ProblemUserNumber,context,[CMFE_PROBLEM_CLASSICAL_FIELD_CLASS, &
& CMFE_PROBLEM_DIFFUSION_EQUATION_TYPE,CMFE_PROBLEM_NO_SOURCE_DIFFUSION_SUBTYPE],Problem,Err)
!Finish the creation of a problem.
CALL cmfe_Problem_CreateFinish(Problem,Err)

Expand Down Expand Up @@ -438,11 +445,10 @@ PROGRAM DIFFUSION_EQUATION
! CALL WRITE_STRING_TWO_VALUE(GENERAL_OUTPUT_TYPE,"User time = ",STOP_USER_TIME(1)-START_USER_TIME(1),", System time = ", &
! & STOP_SYSTEM_TIME(1)-START_SYSTEM_TIME(1),ERR,ERROR,*999)
!
!CALL CMFE_FINALISE(ERR,ERROR,*999)
!CALL cmfe_Finalise(Err)
CALL cmfe_Finalise(context,Err)
WRITE(*,'(A)') "Program successfully completed."


STOP

END PROGRAM DIFFUSION_EQUATION
END PROGRAM DiffusionEquation