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Fixes #1983 Cat Integration. Integration tests failing #1985

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Nov 29, 2021
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Fixes #1983 Cat Integration. Integration tests failing #1985

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41 changes: 2 additions & 39 deletions src/Db/Diff/PKSimDB_diff.txt
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Original file line number Diff line number Diff line change
@@ -1,39 +1,2 @@
UPDATE tab_container_parameter_values SET default_value=0.014070596 WHERE parameter_value_version='AnatomyPhysiology_PKSim' AND species='Cat' AND container_id=147 AND container_type='ORGAN' AND container_name='ArterialBlood' AND parameter_name='Volume';
UPDATE tab_container_parameter_values SET default_value=0.430502115 WHERE parameter_value_version='AnatomyPhysiology_PKSim' AND species='Cat' AND container_id=148 AND container_type='ORGAN' AND container_name='Bone' AND parameter_name='Volume';
UPDATE tab_container_parameter_values SET value_origin=87 WHERE parameter_value_version='AnatomyPhysiology_PKSim' AND species='Cat' AND container_id=149 AND container_type='ORGAN' AND container_name='Brain' AND parameter_name='Specific blood flow rate';
UPDATE tab_container_parameter_values SET default_value=0.025133766, value_origin=88 WHERE parameter_value_version='AnatomyPhysiology_PKSim' AND species='Cat' AND container_id=149 AND container_type='ORGAN' AND container_name='Brain' AND parameter_name='Volume';
UPDATE tab_container_parameter_values SET default_value=0.460798028 WHERE parameter_value_version='AnatomyPhysiology_PKSim' AND species='Cat' AND container_id=152 AND container_type='ORGAN' AND container_name='Fat' AND parameter_name='Volume';
UPDATE tab_container_parameter_values SET default_value=0.009435646 WHERE parameter_value_version='AnatomyPhysiology_PKSim' AND species='Cat' AND container_id=155 AND container_type='ORGAN' AND container_name='Gonads' AND parameter_name='Volume';
UPDATE tab_container_parameter_values SET value_origin=87 WHERE parameter_value_version='AnatomyPhysiology_PKSim' AND species='Cat' AND container_id=156 AND container_type='ORGAN' AND container_name='Heart' AND parameter_name='Specific blood flow rate';
UPDATE tab_container_parameter_values SET default_value=0.014702634, value_origin=90 WHERE parameter_value_version='AnatomyPhysiology_PKSim' AND species='Cat' AND container_id=156 AND container_type='ORGAN' AND container_name='Heart' AND parameter_name='Volume';
UPDATE tab_container_parameter_values SET value_origin=87 WHERE parameter_value_version='AnatomyPhysiology_PKSim' AND species='Cat' AND container_id=157 AND container_type='ORGAN' AND container_name='Kidney' AND parameter_name='Specific blood flow rate';
UPDATE tab_container_parameter_values SET default_value=0.034770107, value_origin=91 WHERE parameter_value_version='AnatomyPhysiology_PKSim' AND species='Cat' AND container_id=157 AND container_type='ORGAN' AND container_name='Kidney' AND parameter_name='Volume';
UPDATE tab_container_parameter_values SET value_origin=87 WHERE parameter_value_version='AnatomyPhysiology_PKSim' AND species='Cat' AND container_id=158 AND container_type='ORGAN' AND container_name='LargeIntestine' AND parameter_name='Specific blood flow rate';
UPDATE tab_container_parameter_values SET default_value=0.016102505, value_origin=89 WHERE parameter_value_version='AnatomyPhysiology_PKSim' AND species='Cat' AND container_id=158 AND container_type='ORGAN' AND container_name='LargeIntestine' AND parameter_name='Volume';
UPDATE tab_container_parameter_values SET value_origin=87 WHERE parameter_value_version='AnatomyPhysiology_PKSim' AND species='Cat' AND container_id=159 AND container_type='ORGAN' AND container_name='Liver' AND parameter_name='Specific blood flow rate';
UPDATE tab_container_parameter_values SET default_value=0.117226673 WHERE parameter_value_version='AnatomyPhysiology_PKSim' AND species='Cat' AND container_id=159 AND container_type='ORGAN' AND container_name='Liver' AND parameter_name='Volume';
UPDATE tab_container_parameter_values SET default_value=0.033479071 WHERE parameter_value_version='AnatomyPhysiology_PKSim' AND species='Cat' AND container_id=160 AND container_type='ORGAN' AND container_name='Lung' AND parameter_name='Volume';
UPDATE tab_container_parameter_values SET default_value=1.505466866 WHERE parameter_value_version='AnatomyPhysiology_PKSim' AND species='Cat' AND container_id=161 AND container_type='ORGAN' AND container_name='Muscle' AND parameter_name='Volume';
UPDATE tab_container_parameter_values SET default_value=0.007386763 WHERE parameter_value_version='AnatomyPhysiology_PKSim' AND species='Cat' AND container_id=162 AND container_type='ORGAN' AND container_name='Pancreas' AND parameter_name='Volume';
UPDATE tab_container_parameter_values SET default_value=0.033562944 WHERE parameter_value_version='AnatomyPhysiology_PKSim' AND species='Cat' AND container_id=165 AND container_type='ORGAN' AND container_name='PortalVein' AND parameter_name='Volume';
UPDATE tab_container_parameter_values SET default_value=0.463032629 WHERE parameter_value_version='AnatomyPhysiology_PKSim' AND species='Cat' AND container_id=167 AND container_type='ORGAN' AND container_name='Skin' AND parameter_name='Volume';
UPDATE tab_container_parameter_values SET value_origin=87 WHERE parameter_value_version='AnatomyPhysiology_PKSim' AND species='Cat' AND container_id=168 AND container_type='ORGAN' AND container_name='SmallIntestine' AND parameter_name='Specific blood flow rate';
UPDATE tab_container_parameter_values SET default_value=0.071925586, value_origin=89 WHERE parameter_value_version='AnatomyPhysiology_PKSim' AND species='Cat' AND container_id=168 AND container_type='ORGAN' AND container_name='SmallIntestine' AND parameter_name='Volume';
UPDATE tab_container_parameter_values SET default_value=0.008393232 WHERE parameter_value_version='AnatomyPhysiology_PKSim' AND species='Cat' AND container_id=169 AND container_type='ORGAN' AND container_name='Spleen' AND parameter_name='Volume';
UPDATE tab_container_parameter_values SET value_origin=87 WHERE parameter_value_version='AnatomyPhysiology_PKSim' AND species='Cat' AND container_id=170 AND container_type='ORGAN' AND container_name='Stomach' AND parameter_name='Specific blood flow rate';
UPDATE tab_container_parameter_values SET default_value=0.021648069 WHERE parameter_value_version='AnatomyPhysiology_PKSim' AND species='Cat' AND container_id=170 AND container_type='ORGAN' AND container_name='Stomach' AND parameter_name='Volume';
UPDATE tab_container_parameter_values SET default_value=0.032362769 WHERE parameter_value_version='AnatomyPhysiology_PKSim' AND species='Cat' AND container_id=171 AND container_type='ORGAN' AND container_name='VenousBlood' AND parameter_name='Volume';
INSERT INTO tab_references(reference) VALUES('Bronson RT. Brain weight-body weight scaling in breeds of dogs and cats. Brain Behav Evol. 1979;16(3):227-36. doi: 10.1159/000121839. PMID: 487065.');
INSERT INTO tab_references(reference) VALUES('Chivers DJ, Hladik CM. Morphology of the gastrointestinal tract in primates: comparisons with other mammals in relation to diet. J Morphol. 1980 Dec;166(3):337-86. doi: 10.1002/jmor.1051660306. PMID: 7441763.');
INSERT INTO tab_references(reference) VALUES('Johnston BM, Owen DA. Tissue blood flow and distribution of cardiac output in cats: changes caused by intravenous infusions of histamine and histamine receptor agonists. Br J Pharmacol. 1977 Jun;60(2):173-80. doi: 10.1111/j.1476-5381.1977.tb07738.x. PMID: 880428; PMCID: PMC1667415.');
INSERT INTO tab_references(reference) VALUES('Joseph, DR. 1908. The ratio between the heart‐weight and body weight in various animals. Jour Exper Med.X:521–522.');
INSERT INTO tab_references(reference) VALUES('Lee JC, Taylor FN, Downing SE. 1975. A comparison of ventricular weights and geometry in newborn, young, and adult mammals. J Appl Physiol 38(1):147–150.');
INSERT INTO tab_references(reference) VALUES('Slatter, DH. 2003. Textbook of Small Animal Surgery, Volume 1. Philadelphia, PA: Saunders. p. 1562.');
INSERT INTO tab_references(reference) VALUES('[Joseph, 1908], [Lee, 1975]');
UPDATE tab_species SET display_name='Cat (IN DEVELOPMENT)' WHERE species='Cat';
UPDATE tab_species SET display_name='Cattle (IV only) (IN DEVELOPMENT)' WHERE species='Cattle';
INSERT INTO tab_value_origins(id,description,source,method) VALUES(87,'Johnston BM, Owen DA. Tissue blood flow and distribution of cardiac output in cats: changes caused by intravenous infusions of histamine and histamine receptor agonists. Br J Pharmacol. 1977 Jun;60(2):173-80. doi: 10.1111/j.1476-5381.1977.tb07738.x. PMID: 880428; PMCID: PMC1667415.','Publication','Undefined');
INSERT INTO tab_value_origins(id,description,source,method) VALUES(88,'Bronson RT. Brain weight-body weight scaling in breeds of dogs and cats. Brain Behav Evol. 1979;16(3):227-36. doi: 10.1159/000121839. PMID: 487065.','Publication','Undefined');
INSERT INTO tab_value_origins(id,description,source,method) VALUES(89,'Chivers DJ, Hladik CM. Morphology of the gastrointestinal tract in primates: comparisons with other mammals in relation to diet. J Morphol. 1980 Dec;166(3):337-86. doi: 10.1002/jmor.1051660306. PMID: 7441763.','Publication','Undefined');
INSERT INTO tab_value_origins(id,description,source,method) VALUES(90,'[Joseph, 1908], [Lee, 1975]','Publication','Undefined');
INSERT INTO tab_value_origins(id,description,source,method) VALUES(91,'Slatter, DH. 2003. Textbook of Small Animal Surgery, Volume 1. Philadelphia, PA: Saunders. p. 1562.','Publication','Undefined');
UPDATE tab_container_parameter_values SET default_value=0.016102505 WHERE parameter_value_version='AnatomyPhysiology_PKSim' AND species='Cat' AND container_id=158 AND container_type='ORGAN' AND container_name='LargeIntestine' AND parameter_name='Volume (default)';
UPDATE tab_container_parameter_values SET default_value=0.071925586 WHERE parameter_value_version='AnatomyPhysiology_PKSim' AND species='Cat' AND container_id=168 AND container_type='ORGAN' AND container_name='SmallIntestine' AND parameter_name='Volume (default)';
4 changes: 2 additions & 2 deletions src/Db/Dump/PKSimDB_dump.txt
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Expand Up @@ -65290,8 +65290,8 @@ INSERT INTO tab_container_parameter_values VALUES('AnatomyPhysiology_PKSim','Cat
INSERT INTO tab_container_parameter_values VALUES('AnatomyPhysiology_PKSim','Cat',169,'ORGAN','Spleen','Volume',0.00839323200000000047,0.0,1,NULL,1,NULL);
INSERT INTO tab_container_parameter_values VALUES('AnatomyPhysiology_PKSim','Cat',170,'ORGAN','Stomach','Volume',0.021648068999999998951,0.0,1,NULL,1,NULL);
INSERT INTO tab_container_parameter_values VALUES('AnatomyPhysiology_PKSim','Cat',171,'ORGAN','VenousBlood','Volume',0.032362768999999999564,0.0,1,NULL,1,NULL);
INSERT INTO tab_container_parameter_values VALUES('AnatomyPhysiology_PKSim','Cat',158,'ORGAN','LargeIntestine','Volume (default)',0.016126999999999998974,0.0,0,NULL,1,NULL);
INSERT INTO tab_container_parameter_values VALUES('AnatomyPhysiology_PKSim','Cat',168,'ORGAN','SmallIntestine','Volume (default)',0.072035000000000001807,0.0,0,NULL,1,NULL);
INSERT INTO tab_container_parameter_values VALUES('AnatomyPhysiology_PKSim','Cat',158,'ORGAN','LargeIntestine','Volume (default)',0.016102504999999999596,0.0,0,NULL,1,NULL);
INSERT INTO tab_container_parameter_values VALUES('AnatomyPhysiology_PKSim','Cat',168,'ORGAN','SmallIntestine','Volume (default)',0.071925585999999999686,0.0,0,NULL,1,NULL);
INSERT INTO tab_container_parameter_values VALUES('Lumen_PKSim','Cattle',4488,'COMPARTMENT','Caecum','Distal radius',0.0,0.0,1,NULL,1,68);
INSERT INTO tab_container_parameter_values VALUES('Lumen_PKSim','Cattle',4489,'COMPARTMENT','ColonAscendens','Distal radius',0.0,0.0,1,NULL,1,68);
INSERT INTO tab_container_parameter_values VALUES('Lumen_PKSim','Cattle',4491,'COMPARTMENT','ColonDescendens','Distal radius',0.0,0.0,1,NULL,1,68);
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Binary file modified src/Db/PKSimDB.sqlite
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