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Protein expression: info missing when transporter direction is not in DB #2034
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We used to set apical basolateral etc... automatically. We do not anymore. Therefore, I am not sure that this message makes sense. |
This message makes very much sense as it is about the direction, not localization. If I add expression of OATP1B1 in V9, I see a warning that "Efflux" was set by default and this might not be correct. So I would know that this is my responsibility to check the direction (it actually must be changed to "Influx"). If I add the same transporter in V10, I do not see this warning and would think that "Efflux" is coming from the DB and is the correct direction. I realized this as I was going through the released models and was wondering why OATP1B1 is set to "Influx" there instead of "Efflux" as given by the DB. Only as I tried to rebuild this in V9 I saw that "Efflux" is as default value and not coming from the DB. |
This is still important I think. |
In PK-Sim 9:
In PK-Sim 10, the hint is missing:
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